Mycobacterium avium subsp. paratuberculosis E1: RC58_13935
Help
Entry
RC58_13935 CDS
T03787
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RC58_13935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mavi02000
]
RC58_13935
Transporters [BR:
mavi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RC58_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJK77605
LinkDB
All DBs
Position
complement(3082249..3083922)
Genome browser
AA seq
557 aa
AA seq
DB search
MAIRIGRRGLTGWVGIGMAVLVVAGVALAGCAGSAAAEIDYVVDGPLSSYNPNTVVGAAS
AGAQAFARTLVGFSYHGPDGQTVPDRDFGTVSVVGGTPLVLDYQIADNAVYSDGKPVTCD
DIVLAWAAQSGRYPEFNAATQAGYLDIANVECMPGQKKARVSFVPDRGIVDYNQLFTATT
LMPSHVIADQLNVDVTAALLSHNAPLVAQIARLWNTIWDLKPGLKGEEIVKRFPSSGPYK
LQAVLDGGAVVLVANDRWWGPKAITKRITVWPQGPDIQDRVNNRSVDVVDVAVGSSGTLA
TPDNYDRSDAPSDGIEQLIFAPQGPLSAPKARRAFALCTPRDVLAKDAGTPIANSRLDPA
VDDAVSADDGAAEAAPFGKADPVAAREALGGAPLAVRIGYQGPNARLAVNVGVITKACAP
AGITVSGVTLDSAGPQALRDGKIDALLASTGGATGSGSSGSSAMDAYALHTGNGNNLSGY
SNPQVDNAIGALAVSADPAERVRLLAETAPVLWGDLPTLPLYRQQRTLLISKKMYAVSKN
PTRWGAGWNMDRWALVQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggccatccgcatcggccgtcgcggcctgacggggtgggtgggcatcggtatggccgtg
ctggtcgtcgcgggcgtcgccctggccggctgcgcgggcagcgccgcggccgagatcgac
tacgtggtcgacggaccgctgagcagctacaaccccaacaccgtcgtcggcgccgcctcg
gccggagcgcaggcgttcgcccgcaccctcgtcgggttcagctatcacggccccgacggg
caaaccgtccccgaccgcgacttcggcaccgtctcggtggtcggcggcaccccgctggtg
ctcgactaccagatcgccgacaacgccgtctactccgacggcaagccggtgacctgcgac
gacatcgtgctggcctgggccgcccagtccggccggtacccggagttcaacgccgccacc
caggccggctacctcgacatcgccaacgtcgaatgcatgcccgggcagaagaaggcccgg
gtgtccttcgtccccgaccgcggcatcgtcgactacaaccagctgttcaccgcgaccacg
ctgatgccgtcgcacgtcatcgccgaccagctcaacgtcgacgtcaccgcggccctgctc
agccacaacgcgccgctggtggcgcagatcgccaggctgtggaacaccatctgggacctc
aaacccgggctgaagggtgaggagatcgtcaagcgcttcccgtcgtcggggccctacaag
ctgcaggccgtcctggacggcggcgcggtggtgctggtcgccaacgaccggtggtggggc
cccaaggccatcaccaagcggatcaccgtgtggccgcagggccccgacatccaggaccgg
gtcaacaaccgcagcgtcgacgtggtcgacgtggccgtcggctcctcgggcacgctggcc
acgccggacaactacgaccgctccgacgccccctccgacggcatcgagcagctgatcttc
gccccgcaggggccgctgtcggcgcccaaggcccgccgcgcgttcgcgctgtgcaccccc
cgcgacgtgctggccaaggacgccgggacgccgatcgccaactcccgcctggacccggcc
gtcgacgacgccgtgtccgcggacgacggcgccgccgaggccgccccgttcggcaaggcc
gacccggtcgccgcccgcgaggcgctgggcggcgcgccgctcgcggtgcgcatcggctac
caggggcccaacgcccggctcgcggtcaacgtcggcgtcatcaccaaggcctgcgccccg
gccggcatcaccgtctccggggtcaccctggacagcgcgggcccgcaggcgctgcgggac
ggcaagatcgacgccctgctggccagcaccggcggcgcgaccggcagcggatcgagcggg
tcgtcggcgatggacgcctacgccctgcacaccggcaacggcaacaacctgtccggctac
tccaatccgcaggtggacaacgcgatcggggcgctggcggtgtcggccgaccccgccgag
cgggtccggctgctggccgagaccgccccggtgctgtggggcgacctgcccacgctgccg
ctgtaccggcagcagcgcaccctgctgatctccaagaagatgtacgcggtgagcaagaac
cccacccggtggggcgcggggtggaacatggaccgatgggccctggtgcagtga
DBGET
integrated database retrieval system
