Mycobacterium avium subsp. paratuberculosis E1: RC58_13975
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Entry
RC58_13975 CDS
T03787
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RC58_13975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_13975
Enzymes [BR:
mavi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RC58_13975
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RC58_13975
RecFOR pathway proteins
RC58_13975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF4253
Motif
Other DBs
NCBI-ProteinID:
AJK75989
LinkDB
All DBs
Position
complement(3095529..3096095)
Genome browser
AA seq
188 aa
AA seq
DB search
MRVMGVDPGLTRCGLSVVESGRGRTVVALDVDVVRTPSDAPLAERLLSISDAVEHWLATH
QPDVVAIERVFSQLNVTTVMGTAQAGGVVALAAAKRGIGVHFHTPSEVKAAVTGNGAANK
AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMARAEALAAQQRQKYKDKV
DATLRAAR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgatgggcgtcgaccccggcctgacccggtgcgggctgtcggtggtggaaagc
gggcgcggtcgcaccgtcgtcgcgctggacgtcgacgtggtgcgcaccccgtcggacgcg
ccgctggccgagcggctgctgagcatcagcgacgcggtcgagcattggctggccacccat
cagccggacgtggtggccatcgagcgggtgttctcccagctgaatgtgacgaccgtgatg
ggcaccgcccaggccggcggcgtagtggcgctggcggcggccaaacgcggcatcggcgtg
cacttccacacccccagcgaggtcaaggccgcggtgaccggcaacggcgccgccaacaag
gcccaagtcaccgcgatggtcaccagaatccttgcgctgcaagccaaaccgacacccgcc
gacgccgccgacgcgctggcgctggccatctgccactgctggcgggcgccgatgatcgcc
cggatggcgcgggccgaggcgctggcggcccagcagcggcagaaatacaaggacaaggtg
gacgcgacgctgagggccgcgcgatga
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