Mycobacterium avium subsp. paratuberculosis E1: RC58_14250
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Entry
RC58_14250 CDS
T03787
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00300
Lysine biosynthesis
mavi00470
D-Amino acid metabolism
mavi01100
Metabolic pathways
mavi01110
Biosynthesis of secondary metabolites
mavi01120
Microbial metabolism in diverse environments
mavi01230
Biosynthesis of amino acids
Module
mavi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RC58_14250
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RC58_14250
Enzymes [BR:
mavi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RC58_14250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
F_bP_aldolase
A_deaminase
Motif
Other DBs
NCBI-ProteinID:
AJK76035
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All DBs
Position
3150910..3152250
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AA seq
446 aa
AA seq
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MTLLDILPSLGHAAPPRFDPAIWPVTAHPDEEGRLCVGGVPLGDVADEFGTPAYVVDEAD
FRCRARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGELATALAGGVDPAR
IVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARRRQPVLIRVTPDIDIHGHRA
VTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVSDPALYGEAIRRMIA
AMADIRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDALDEACAAERFPRPQI
VVEPGRAISGRAGVTLYRVCSVKTQGGGRTFVAVDGGMSDNPRVSLYGARYAVALANRHP
LGLKQRVTVAGRHCESGDEIARDVELPADLRPGDLLAVACTGAYHHSMASNYNMVGRPPL
VAVSEGRARELVRRETVADLLARDRG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacattgctggacatcctgccgtcgctgggtcacgcggctcccccacggttcgatccg
gcgatctggcccgtcaccgcccatcccgacgaggagggccggctgtgcgtcggcggcgtg
ccgctgggcgacgtcgccgacgagttcggcaccccggcctacgtcgtcgacgaagccgac
ttccggtgccgcgcccgccggtaccgcagggcgctgcgcggcgtcgaggtggtctacgcc
ggcaagtccctgctgagcaccgcggtggcccggtgggcccgcgaggagcgcctcggcgtc
gacgtctgctcggccggtgaactggccaccgcgctggccggcggggtcgacccggcccgc
atcgtcatgcacggcaacgcgaaatcgcccgaggagctgcgcgaggcggtgcgcgtcggg
gtgggccgcatcgtgctggattcgaccatcgagatcgcgtatctggccggcctggcccgt
cgccgccagccggtgctcatccgggtcacccccgacatcgacatccacgggcatcgcgcc
gtcaccaccggcgtcagcgaccagaagttcggcttcaccctggccggcgaccacgcggcc
gacgcggtgcgccgggtgctggcccaccccatcctcgacctggtcggcctgcactgccac
ctcggctcgcaggtgtccgaccccgccctgtacggcgaggcgatccgccggatgatcgcc
gcgatggccgatatccgggcccggcacggcgtcatcctgaccgagctgaatatcggtggg
ggacatgccattccgtatgcgtccggcgacccggagctgaacctcgaccagctggccgac
gtgatcgaggacgccctggacgaggcgtgcgccgccgagcggttcccccgcccgcagatc
gtggtggagccgggccgggcgatcagcggtcgggccggggtgaccctgtaccgggtgtgc
tcggtgaagacgcaaggcggcgggcggaccttcgtcgccgtcgacggcggcatgagcgac
aacccgcgggtgtcgctgtacggcgcgcggtatgccgtcgcgctggccaaccggcatccg
ctgggcctcaagcagcgggtcacggtggcgggccggcactgcgagtccggcgacgagatc
gcccgcgacgtcgagctgcccgccgatctgcgcccgggtgacctgctggccgtggcctgc
accggcgcctaccaccacagcatggcgtcgaactacaacatggtcgggcgcccgccgctg
gtggcggtcagcgagggccgggcccgggaactggtccgccgcgaaaccgtggccgacctg
ctggcccgcgaccgcgggtag
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