Mycobacterium avium subsp. paratuberculosis E1: RC58_14730
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Entry
RC58_14730 CDS
T03787
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi03420
Nucleotide excision repair
mavi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RC58_14730
03430 Mismatch repair
RC58_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavi03400
]
RC58_14730
Enzymes [BR:
mavi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RC58_14730
DNA repair and recombination proteins [BR:
mavi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RC58_14730
MMR (mismatch excision repair)
Other MMR factors
RC58_14730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
OstA_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJK76119
LinkDB
All DBs
Position
complement(3253301..3255625)
Genome browser
AA seq
774 aa
AA seq
DB search
MSVHVTDAKPVSEAEQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRVAYLIAA
RGVGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPAAAVANLTDGSD
ELSRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQD
TNHAQYVLVRELVGTDTEDGVPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDATTI
LLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVGYVADNEHDEARFVAEEI
DALAQKGEITYNDVAVFYRTNNSSRSFEEVFIRAGIPYKVVGGVRFYERKEIRDIIAYLR
VLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPMLNSRA
EKAIAGFVELLDDLRGRLDDDLGDLVESVLERTGYRRELESSTDPQELARLDNLNELVSV
AHEFSTDRANAAALDESLDAADDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAGMVTLMT
LHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPVELSEERRLAYVGITRARQRLYLSRAIVR
SSWGQPMLNPESRFLREIPQELIEWRRTAPAPSFSAPVSGAGRFGTPRAAPTRAAMSKRP
LLVLAPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSSGRVKLMHNHAPISKL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgtaacagatgccaagccggtctccgaagccgagcaattgctcgagggg
ctcaatccgcaacagcgccaggccgtggtgcacgagggttcgccgctgctgatcgtcgcc
ggggcgggttcggggaagacggcggtgctgacccgccgcgtcgcctacctgatcgcggcc
cgcggggtcggggtgggccaggtgctggccatcaccttcaccaacaaggccgccgccgag
atgcgggaacgggtggtgcggctggtgggcaaccgggcccgcgccatgtgggtgtccacc
tttcattcgacctgcgtgcgcatcctgcgcaaccaggcgtcgctgatcgagggcctcaat
tccaacttctcgatctacgacgccgacgactcgcggcggctgctgcagatgatcggccgc
gacatgggcctggacatcaagcgctactcgccgcggctgttggccaacgcgatctccaac
ctgaagaacgagctgatcgaccccgccgcggcggtcgccaacctcaccgacggttccgac
gagttgtcccgcaccgtggcaagcgtctacggcgaataccagcgccggctgcgggcggcc
aacgcgctggacttcgacgacctgatcggcgagacggtggcggtgctgcgggccttcccg
cagatcgcccagcactaccggcggcggttccggcacgtgctcgtcgacgagtaccaggac
accaaccacgcgcagtacgtgctggtgcgcgagttggtgggcaccgacaccgaggacggc
gttccccccggcgagctgtgcgtggtcggcgacgccgaccagtcgatctatgccttccgc
ggcgccaccatccgcaacatcgaggacttcgaacgcgactacccggacgcgacaaccatt
ctgctggaacagaattaccgctcgacacagaacatcctgtcggcggccaactcggtgatc
gcgcgtaactccggtcgccgcgacaagcggctgtggaccgacgccggcgccggcgagctg
atcgtcggctacgtcgccgacaacgagcacgacgaggcccgcttcgtcgccgaggagatc
gacgcgctcgcgcagaagggcgagatcacctacaacgacgtcgccgtcttctaccgcacc
aacaactcgtcgcggtccttcgaggaggtgttcatccgcgccgggatcccctacaaagtc
gttgggggagtgcgcttttacgagcgcaaggagatccgcgacatcattgcctacctgcgg
gtgctggacaaccccggcgacgcggtgagcatgcggcgcatcctcaacaccccgcgccgg
gggatcggtgatcgggccgaggcctgcgtggcggtgtacgccgagaacaccggtgccagt
ttcgccgacgcgctggtggccgcggccgaaggcaaagtgccgatgctgaattcgcgcgcg
gagaaggcgatcgcgggtttcgtcgagttgctggacgacctgcgcggccggctggacgac
gatctcggcgacctggtcgagtcggtgctcgaacgcaccggctaccgccgggagctggaa
tcgtccaccgatccccaagagctggcgcgtctggacaacctcaacgaactcgtcagcgtc
gcacacgaattcagcaccgaccgggcgaacgccgccgcgctggacgagtcgctggatgcc
gcggacgacgaagacgtgcccgacaccggtgtgctggccgagttcttggaacgggtctcg
ctggtctccgacagcgacgagatccccgaggacggcgccgggatggtcacgctgatgacc
ctgcacaccgcgaagggcctggagttcccggtggtgttcgtcaccggctgggaggacggg
atgttcccgcacatgcggtcgctggacgatccggtcgaactctccgaggagcggcggctg
gcctacgtgggcatcacccgggcccggcagcggctctacctgagccgggccatcgtccgc
tcgtcgtggggccagcccatgctcaacccggaatctcggttcctgcgggagattccgcag
gaactgatcgagtggcggcgcaccgcgccggcgccgtcgttcagcgcaccggtcagcggc
gccggccggttcggcaccccgcgggcggccccgacccgcgccgcaatgagcaaacggccg
ctgctggtgctggcgccgggcgaccgggtgacgcacgacaagtacgggctcggccgggtc
gaggaggtgtccggcgccggcgagtcggcgatgtcactgatcgacttcggcagctccggg
cgggtgaagctgatgcacaaccacgccccgatcagcaagctctaa
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