Mycobacterium avium subsp. paratuberculosis E1: RC58_17230
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Entry
RC58_17230 CDS
T03787
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi02020
Two-component system
mavi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RC58_17230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RC58_17230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mavi03000
]
RC58_17230
Transcription factors [BR:
mavi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RC58_17230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
Sigma70_r4
GntR
Sigma70_r4_2
MarR_2
HTH_29
HTH_24
HTH_3
HTH_23
MarR
HTH_IclR
HTH_ParB
wHTH-PRTase_assc
HTH_28
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJK76548
LinkDB
All DBs
Position
3746414..3747088
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AA seq
224 aa
AA seq
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MDEILARAGIFQGVEPSAVTALTKQLQPVDFPRGHTVFAEGEPGDRLYIIVSGKVKIGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIA
EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGAMRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgagatcctggcaagggcaggaatcttccaaggggttgagcccagcgcagtcacc
gcactgaccaagcagctccaacccgtcgacttcccccgcggacacaccgtcttcgccgaa
ggggaaccgggggatcggctgtacatcatcgtctcgggcaaggtgaagatcggtcgccgc
tcgcccgacgggcgggaaaacctgctgacgatcatgggcccctcggacatgttcggtgag
ctgtcgatcttcgacccgggcccgcggacgtccagcgccaccaccatcaccgaggtgcgc
gcggtgtcgatggaccgcgatgcgctgcgcgcgtggatcgccgaccgccccgagatcgcc
gaacagctgttgcgggtgctggcccgccggttgcgccgcaccaacaacaacctggccgac
ctcatcttcaccgacgtgcccggccgggtggccaagcagctgctgcagctcgcgcagcgc
ttcggcacccaggagggcggcgccatgcgggtcacccacgacctgacccaggaagagatc
gcgcagctggtcggggcgtcgcgggagacggtgaacaaggcgctggccgatttcgcccac
cgcggctggatccggctggagggcaaaagcgtgctgatctcggactccgagcggctggcg
cggcgagcgaggtaa
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