Mycobacterium avium subsp. paratuberculosis E1: RC58_18090
Help
Entry
RC58_18090 CDS
T03787
Name
(GenBank) arabinosyltransferase
KO
K11387
arabinosyltransferase C [EC:2.4.2.-]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Pathway
mavi00571
Lipoarabinomannan (LAM) biosynthesis
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00571 Lipoarabinomannan (LAM) biosynthesis
RC58_18090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mavi01003
]
RC58_18090
Glycosyltransferases [BR:
mavi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RC58_18090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
AJK76693
LinkDB
All DBs
Position
3913895..3917170
Genome browser
AA seq
1091 aa
AA seq
DB search
MSTDTGSRIAEELASSSVHDTEANHRIARWVASVAGLLGVLLAVATPLLPVDQTTAQLNW
PQNGSFGSVEAPLIGYVATDLNITVPCQAAAGLAGRGNPGKTVLLSTVPKQAPKAVDRGL
LIVRANDDLVLVVRNVPVVTAPLSQVLGPACQRLTFTAHADKVTAEFVGLTQGPNTEHPG
VPLRGEKSGYDFRPQIVGVFTDLSGPAPPGLSFSATIDTRYSSSPTPLKMAAMILGLVLT
GAALVALHILDTADGTRHRRFLPARWWSIGGLDALVIAVLTWWHFVGANTSDDGYILTMA
RVSEHAGYMANYYRWFGTPEAPFGWYYDLLALWAHVSTTSIWMRLPTLAMALTCWWVISR
EVMPRLGHAVKQNRAAAWTAAGMFLAVWLPLDNGLRPEPIIALGILLTWCSVERAVATSR
LLPVAVACIIGALTLFSGPTGIASIGALLVAIGPLRTILHRRITRFGALPLIAPLLAAAT
VTAILIFRDQTLAGEVQASMLKRAVGPSLSWFDEHIRYERLFMASPDGSVARRFAVLALV
LALGVTVAMSLRKGRIPGTATGPSRRIVGITIISFVAMMFTPTKWTHHFGVFAGLAGPLG
ALAAVAVTAAAMRSRRNRTVYAAVVLFLVALSFASVNGWWYVSNFGVPWSNAFPAWHYAF
ATALLGLTVLVLLLAAWFHFVAPDDGPPKTRWGARLAGIIQSPLAIATWALVVFEVASLT
LAMTDQYPAWSVGRSNLQALTGKTCGLAEDVLVEQDPSAGLLSPVGGPAGPSAADALGAG
LSEAFTANGIPADVRADPVMERPGDRSFVNDEEKTGSNQAGTEGGTTPAPGINGSSAQLP
FNLDPARTPVLGSWRSGIQVPAHLRSGWYRLPARDKARPLLVVSAAGRFDPREVQVQWAT
DEQAAGGHPGGSFQFADVGASPAWRNLRLPLSAIPAAATQVRLVADDEDLAPQHWIALTP
PRIPQLRTLQDVVGSKDPVFLDWLVGLAFPCQRPFGHQNGVDETPKWRILPDRFGAEANS
PVMDNNGGGPLGVTELLAKATTMATYLKDDWSRDWGSLQRLTPYYPDARPAQLLLGTATR
SGLWNPAPLRH
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacaccgggtcccgcatcgccgaagaactagcatctagctccgtgcacgac
acggaggcaaatcaccggatcgctcggtgggttgcctctgtcgccgggctgctcggggtg
ctgctggcggtggccaccccgctgttgccggtcgaccagaccaccgcccagctgaactgg
ccccagaacggcagcttcggcagcgtggaggcgccgctgatcggttacgtggccaccgat
ttgaacatcaccgtcccgtgccaggccgccgccgggctggccggccggggcaaccccggc
aagacggtgttgttgtcgacggtgcccaagcaggcgcccaaggcggtcgaccgcgggctg
ctgatcgtgcgggccaacgacgacctggtgctggtggtgcgcaacgtcccggtggtgacg
gccccgctgagccaggtgctgggcccagcctgccagcggttgaccttcaccgcgcacgcc
gacaaggtcaccgccgagttcgtcgggctcacccagggccccaacaccgagcatcccggc
gtgccgctgcgcggcgagaaaagcggctatgacttccggccgcagatcgtcggcgtcttc
accgacctgagcggaccggcgccgccgggcctgagcttctcggcgaccatcgacacccgc
tacagcagcagccccaccccgctgaagatggccgcgatgatcctcggcctggtgctgacg
ggcgcggcgctggtcgcgctgcacatcctggacaccgccgacggcacccggcaccgccgc
ttcctgcctgcccgctggtggtcgatcggcgggctggacgcgctggtcatcgccgtgctg
acgtggtggcatttcgtcggcgccaacacctccgacgacggctacatcctgaccatggcc
cgggtgtccgagcacgccggctacatggccaactactaccgctggttcggcacgcccgaa
gcgccgttcggctggtactacgacctgctggcgctgtgggcgcacgtcagcaccaccagc
atctggatgcggctgcccaccctggcgatggcgttgacctgctggtgggtgatcagccgc
gaggtgatgccgcggctgggtcacgccgtcaagcaaaaccgggcggcggcctggacggcg
gcgggcatgttcctggcggtgtggctgccactggacaacggcctgcggcccgagccgatc
atcgccctgggcatcctgctgacctggtgctcggtggaacgcgcggtggccaccagccgg
ctgctgccggtcgcggtcgcctgcatcatcggcgcgctgaccctgttctccgggccgacg
ggcatcgcctcgatcggcgcgctgctggtcgcgatcgggccgctgcgcacgatcctgcac
cgccggatcacgcgattcggcgcgctcccgctgatcgcgcccctgctggccgcggccacc
gtcaccgccatcctgatcttccgcgaccagacgctggccggggaggttcaggccagcatg
ctcaagcgcgccgtcgggcccagcctgagctggttcgacgaacacatccgctacgagcgg
ctgttcatggccagcccggacgggtcggtcgcccgccgcttcgccgtgctggcgctggtg
ctcgcgctcggagtgaccgtcgcaatgtcgttgcgcaagggccgaattcccggcaccgcc
accgggccgagccggcgcatcgtcgggatcaccatcatctcgttcgtcgcgatgatgttc
acccccaccaaatggacgcaccacttcggggtgttcgccgggctggccgggccgctgggt
gcgctggccgcggtcgcggtgaccgcggcggcgatgcggtcccggcgcaaccgcaccgtc
tacgccgccgtggtgctgtttttggtggcgctgtcgttcgccagcgtcaacggctggtgg
tacgtctcgaatttcggtgtgccgtggtcgaatgcgttcccggcgtggcattatgcgttc
gccaccgcgctgctcggactgaccgtgctggtgctgctgctggcggcctggttccatttc
gtggcgcccgacgacggcccgccgaaaacccgctggggggcgcggctggccggaatcatc
cagtcccccttggcaattgcgacctgggcgctggtggtgttcgaggtggcgtcgctgacc
ttggcgatgacggaccagtatccggcgtggtcggtcggccgctccaatttgcaggcgttg
accgggaagacgtgcggcctggccgaggacgtgctggtggaacaggaccccagcgccggc
ctgctgtcgccggtcggcggcccggccggcccgtcggcagccgacgcgctgggcgcgggg
ttgtcggaagccttcaccgccaacgggattcccgccgacgtgcgcgccgacccggtgatg
gaacgcccgggtgaccgcagcttcgtcaacgacgaggagaaaaccggcagcaaccaggcc
ggcaccgagggcggcaccaccccggcgccggggatcaacgggtcgtcggcccagctgccg
ttcaacctcgacccggcgcgcaccccggtgctgggcagctggcgctccggtatccaggtg
cccgcccacctgcggtccggctggtaccggctgcccgcccgcgacaaggcgcggccgctg
ctggtggtcagcgcggccgggcgcttcgacccgcgcgaggtccaggtgcagtgggccacc
gacgagcaggcggccggtgggcacccgggcggctcgttccaattcgccgacgtcggcgcg
tcaccggcctggcgcaacctgcggttgccgctgtcggcgatcccggccgccgccacccag
gtccggttggtcgccgacgacgaagacctggccccgcagcattggattgcgctgacgccg
ccgcgtattccccagctgcgcaccctgcaggacgtggtgggatcgaaggacccggtgttc
ctggactggctggtcgggctggccttcccctgccagcggccgttcggccatcagaacggc
gtggacgagacgccgaaatggcgcatcctgccggaccgattcggcgccgaggccaactcg
ccggtgatggacaacaacggcggcggcccgctgggcgtcaccgagctgctggccaaggcc
accaccatggccacctacttgaaggacgactggtcccgcgactggggctcgctgcaacgg
ctgaccccgtactatcccgacgcccggcccgcccagctgctgctgggcacggcgacgcgc
agcgggctgtggaacccggcgccgctgcggcactga
DBGET
integrated database retrieval system
