Mycobacterium avium subsp. paratuberculosis E1: RC58_21660
Help
Entry
RC58_21660 CDS
T03787
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mavi03016
]
RC58_21660
Enzymes [BR:
mavi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RC58_21660
Transfer RNA biogenesis [BR:
mavi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RC58_21660
Prokaryotic type
RC58_21660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJK77312
LinkDB
All DBs
Position
4654450..4655205
Genome browser
AA seq
251 aa
AA seq
DB search
MAGVLDEALTTVFRTPVRLRAAGRTDAGVHATGQVAHLDVPGTALPNAYPRAPHVGEAEF
GPLLRRLGRFLPTDVRVVDITRAPAGFDARFSALRRHYVYRLSTAPWGVLPQQARYVTAW
PRPLDVEAMAAASRDLLGLHDFAAFCRHRENATTIRDLQRLDWTRDGDLITARVSADAFC
WSMVRSLVGALLAVGENRRPVSWCRELLSATNRSSDYATAPAHGLTLVGVDYPPDDQLAA
RNLITRDVRSR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggccggggtgctcgacgaggcgctgacgaccgtcttccgcacgccggtgcggttgcgc
gccgcgggccgtaccgacgcgggggtgcacgccaccgggcaggtcgctcatctcgacgtg
ccgggcaccgcgctgccgaacgcctatccgcgcgcaccgcacgtcggcgaagccgaattc
gggccgctgctgcgccggctgggccggttcctgcccaccgacgtccgcgtcgtcgacatc
acccgcgcgccagcgggtttcgacgcccggttctcggcgctgcggcgccactacgtctac
cggctctcgacggccccgtggggtgtgctgccgcagcaggctcgctacgtcaccgcctgg
ccccgccccctggatgtcgaggcgatggccgccgcgtcgcgagacctgttggggctgcac
gacttcgccgcgttctgccgtcaccgcgagaacgccaccaccatccgcgacctgcagcgc
ctggactggacccgcgacggcgacctgatcaccgcgagggtcagcgccgacgcgttctgc
tggtcgatggtgcgctccctggtgggggcgctgctggcggtcggggagaaccggcggccg
gtgtcctggtgtcgcgaattgctcagcgccacaaaccgatccagtgactacgccaccgca
ccagcgcacgggctgaccctggtcggggtcgactacccgccggatgaccagctggcggcg
cgcaacctgatcacccgcgacgtgcgctcgcgctag
DBGET
integrated database retrieval system
