Mycobacterium avium subsp. avium: MAA44156_01227
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Entry
MAA44156_01227 CDS
T10718
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mavm Mycobacterium avium subsp. avium
Pathway
mavm03030
DNA replication
mavm03430
Mismatch repair
mavm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAA44156_01227 (dnaE)
03430 Mismatch repair
MAA44156_01227 (dnaE)
03440 Homologous recombination
MAA44156_01227 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mavm03032
]
MAA44156_01227 (dnaE)
03400 DNA repair and recombination proteins [BR:
mavm03400
]
MAA44156_01227 (dnaE)
Enzymes [BR:
mavm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAA44156_01227 (dnaE)
DNA replication proteins [BR:
mavm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAA44156_01227 (dnaE)
DNA repair and recombination proteins [BR:
mavm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAA44156_01227 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QGW31474
LinkDB
All DBs
Position
1269241..1272774
Genome browser
AA seq
1177 aa
AA seq
DB search
MNHSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNAATKA
GIKPIIGVEAYIAPGSRFDTRRILWGDPSQKADDVSGSGSYTHLTMVAENAAGLRNLFKL
SSLASFEGQLGKRSRMDAELIAEHADGIIATTGCPSGEVQTRLRLGQDREALESAAKWRE
IFGADNFFLELMDHGLSIEQRVRDGLLEIGRKLNIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRQIWDAEVPGACDSTLLIAERVQSYAEVWTPRD
RMPVFPVPEGHDQASWLHHEVMAGLRRRFPDGVGQDYIDRAEYEIKVICDKGFPSYFLIV
ADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPSHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNI
KANRGIDLDLESVPLDDKATYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGQDIRFGLGAVRNVGANVVGSLIKTRNEKGKFTDFSDYLNKIDISACNKKV
TESLIKAGAFDSLKHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGDGGCTESVFTIK
VPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDAVVLINAKVAIR
DDRIALIANELVVPDFSTAQVDRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRLI
SGDRITTLELDASLRVTPSPALMGDLKELLGPGCLGG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgtccttcgtgcacctgcacaaccacaccgagtattcgatgctggacggt
gccgcgaagatcaccccgatgctcgccgaggtggagcggctgggcatgcccgcggtcggg
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgccgccaccaaggcc
gggatcaagccgatcatcggcgtggaggcctacatcgcgccgggctcccggttcgacacc
cggcggatcctgtggggggatcccagccagaaggccgacgacgtgtccggcagcggctcc
tacacccacctgaccatggtggccgagaacgcggccggcctgcgtaacctgttcaagctg
tcctcgctggcctcgttcgagggccagctgggcaagcggtcgcggatggacgccgagctg
atcgccgaacatgccgacggcatcatcgccaccaccggctgcccctccggggaggtgcag
acccggctgcggctgggccaggaccgcgaggcgctcgagtcggcggccaagtggcgcgag
atcttcggcgccgacaacttcttcctcgagctgatggaccacggcctgtccatcgagcag
cgggtccgcgacggcctgctggagatcggccgcaagctgaacatcccgccgctggccacc
aacgactgccactacgttacccgcgacgccgcgcacaaccacgaggcgctgctgtgcgtg
cagaccggcaagacgctctcggacccgaaccggttcaagttcgacggcgacggctactac
ctcaagtcggccgccgagatgcgccagatctgggacgccgaggtgcccggcgcgtgcgac
tccaccctgttgatcgccgaacgggtgcagtcctacgcggaggtgtggacgccgcgcgac
cggatgccggtcttcccggtgcccgagggtcacgaccaggccagctggctgcaccacgag
gtgatggccgggctgcggcggcggttcccggacggggtcggccaggactacatcgaccgg
gccgaatacgagatcaaggtcatctgcgacaagggttttccgtcctacttcctgatcgtc
gccgacctgatcaactacgcccgctcggtcgacatccgggtggggcccgggcgtggctcg
gcggccggctccctggtggcctacgcgctgggcatcaccaacatcgacccgattccgcac
ggcctgctgttcgagcggttcctcaacccggagcggccgtcggcgcccgacatcgacatc
gacttcgacgaccgtcgccgcggcgagatggtgcgctacgccgccgacaagtggggctcc
gaccgggtcgcccaggtcatcaccttcggcaccatcaaaaccaaagcggcgctgaaggat
tcggcgcggatccactacggtcaaccgggcttcgcgatcgccgaccggatcaccaaggcg
ctgccgccgccgatcatggccaaggacatcccgctgtccggcatcaccgaccccagccac
gagcggtacaaggaagccgccgaggtgcgcggcctgatcgagaccgaccccgacgtgcgc
accatctaccagaccgcccgcggtctggagggtttgatccgcaacgccggcgtacacgcg
tgcgcggtgatcatgagcagcgagccgctgaccgaggccatcccgctgtggaagcggccg
caggacggcgccatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aagatggacttcctgggcctgcgcaacctgacgatcatcggcgacgccctggacaacatc
aaggccaaccggggaatcgacctcgacctggaatcggtgccgctggacgacaaggcgacc
tacgagctgctggggcgcggcgacaccctgggcgtgttccagctcgacggcgggccgatg
cgcgacctgctgcgccgcatgcagcccacggagttcaacgacatcgtggcggtgctggcg
ctgtatcgccccgggccgatgggtatgaacgcccacaacgactacgccgaccgcaagaac
ggccgccagccgatcaagccgatccaccccgagctcgaggagccgctgcgtgaaatcctc
tccgagacttacggtttgatcgtctaccaagagcagatcatgttcatcgcccagaaggtg
gcctcttacaccatgggcaaggccgacgcgctgcgcaaggcgatgggcaagaagaagctc
gaggtgctcgaggccgagtacaagggcttctacgagggcatgaccgccaacgggttctcc
gagaaggcggtaaaagccttgtgggacaccattcttccgttcgccgggtatgcgttcaac
aagtcgcacgccgctggctacgggctggtgtcgtactggaccgcgtatctgaaggccaac
tatccggccgaatacatggccgggctgctgacctcggtgggcgacgacaaggacaaggcc
gcggtctatctggccgactgccgcaagctgggcatcacggtgttgccgccggacgtcaac
gagtcgctggtcaacttcgcctcggtcggccaggacatccgcttcgggttgggcgcggtg
cgcaacgtcggcgccaacgtggtcggttcgctgatcaagacccgcaacgagaagggcaag
ttcaccgacttctccgactacctgaacaagatcgacatctcggcctgcaacaagaaggtg
accgagtcgctgatcaaggccggcgcgttcgactcgctcaagcacgcgcgcaagggcctg
ttcctggtacacaccgatgcggtcgattcggtgctgggcaccaagaaggccgaggcgatg
ggccagttcgacctgttcggcggcgacggcggctgcaccgagtcggtgttcaccatcaag
gtgcccgacgacgagtgggaggacaagcacaagctcgcgctggagcgggagatgctgggg
ctctacgtgtccgggcatccgctcaacggggtggcgcatctgctggccgcgcaggtggac
acccagatcccggccatcctggacggcgacgtgcccaacgagacccaggtgcgggtcggc
ggcatcctggcgtcggtcaaccggcgggtcaacaagaacgggatgccttgggcgtcagcg
caattggaggacctcaccggtggcatcgaggtgatgttcttcccgcacgcctactccacc
tacggcgccgacatcgccgacgacgccgtggtgctgatcaacgccaaggtggcgatccgt
gacgaccggatcgcgctgatcgccaatgagcttgtggtgccggacttttccactgcccag
gtggaccggccgctggcggtcagcctgccgacgcggcagtgcaccatcgacaaggtcacc
gcgctcaagcaggtgctggcccgtcatccgggaacctcgcaggtgcatctgcggctgatc
agcggcgaccggatcaccacgttggagctggacgcgtcgctgcgggtgacgccgtcgccg
gcgttgatgggcgacctcaaagagctgctcggccccggctgcctcggcgggtag
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integrated database retrieval system
