Mycobacterium avium subsp. avium: MAA44156_02861
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Entry
MAA44156_02861 CDS
T10718
Symbol
deaD
Name
(GenBank) Cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mavm Mycobacterium avium subsp. avium
Pathway
mavm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mavm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAA44156_02861 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mavm03019
]
MAA44156_02861 (deaD)
03009 Ribosome biogenesis [BR:
mavm03009
]
MAA44156_02861 (deaD)
Enzymes [BR:
mavm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MAA44156_02861 (deaD)
Messenger RNA biogenesis [BR:
mavm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MAA44156_02861 (deaD)
Ribosome biogenesis [BR:
mavm03009
]
Prokaryotic type
rRNA helicases
MAA44156_02861 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QGW33055
LinkDB
All DBs
Position
complement(3095075..3096775)
Genome browser
AA seq
566 aa
AA seq
DB search
MTLPDSSTEAASPTFADLQIHPSVLRAIADVGYETPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSNIDVASTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS
SYAVQLAGLKRGAHVVVGTPGRVIDHLERGTLNLSHVDYLVLDEADEMLTMGFAEEVDRI
LSETPEYKQVALFSATMPPAIRKLTAKYLHDPLEVSTKAKTTTAENISQRYIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIPQGQRERTVAALKD
GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQPLTEAELPTVEDVNAQRVAKFADSITAALGAPGIDLFRKLVQDYERE
HDVPMADIAAALAVQSRDGEEFLMAPEPPRERRERHTERRERTEKPRSTRPLATYRIAVG
KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSLVELPAKLPKSTLKRLEQTRISGVL
INLQPDRAAAKARGRDGGKPRRKYGG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcccggacagctcgactgaggctgcctccccgacatttgccgacctgcagatc
catccctcggttttgcgggcgatcgccgacgtcggctacgagacgcccaccggcatccag
gccgcgaccatcccggcgttgatggccggttccgacgtcgtcggcctggcccagaccggc
accggcaagacggccgcgttcgcgatcccgatcctgtccaacatcgacgtcgccagcacc
gccacccaggcgctggtgctggcgcccacccgggagctggcgttgcaggtggccgaggcg
ttcagccgctacggcgcgcatctgccgaagatcaacgtgctgccgatctacggcggctcc
tcctacgccgtgcagctggccggattgaaacgcggcgcccacgtggtggtcggcacgccg
ggccgggtgatcgaccacctcgagcgcggcacgctgaacctgtcgcacgtcgactacctg
gtgctcgacgaggccgacgagatgctcaccatgggatttgccgaagaggtcgaccgcatc
ctgtccgagaccccggaatacaagcaggtcgcgctgttctcggcgaccatgccgcccgcg
atccgcaagctcaccgccaagtatctgcacgatcccctcgaggtcagcaccaaagcgaaa
accacgaccgccgagaacatttcgcagcgctacatccaggtcgccggcccgcgcaaaatg
gacgcgctgacccgggtgctggaggtcgagccgttcgaggcgatgatcgttttcgtccgg
accaaacaggccaccgaggaggtcgccgaacggctcagggcgcgcggcttctcggcggcc
gcgatcaacggggacatcccgcagggccagcgtgagcggaccgtcgccgccctcaaggac
ggcggcatcgacatcctggtcgccaccgacgtggccgcccgaggcctggacgtcgaacgg
atctcacacgtgctcaactacgacatcccgcacgacaccgagtcctacgtgcaccggatc
gggcgcaccggccgggcgggacgctcgggaaccgcgctgctgttcgtctccccgcgagaa
cgccacctgctcaaggccattgagaaggcgacccgccagccgctcaccgaagccgagctg
cccaccgtcgaggacgtcaacgcccagcgggtggccaagttcgccgactccatcaccgcc
gcgctcggcgctcccggcatcgatctgttccgcaagttggttcaggactacgaacgcgag
cacgacgtcccgatggccgatatcgccgccgcgctggccgtgcagtcacgcgacggcgag
gagttcctgatggcgcccgaaccgccgcgggagcgacgcgaacgccacaccgaacggcgc
gagcgcaccgagaaacccaggagcacaaggccgttggccacctaccgcatcgcggtgggc
aaacggcacaagatcggtccgggcgcgatcgtgggcgccatcgccaacgagggcgggctg
catcgcagcgatttcggccacatcgccatcggacccgacttctcgctggtggagttgccg
gccaagctgcccaagtcgacgctgaaaaggcttgagcagacccgaatctccggagtgctg
atcaacctccagccggaccgggcggcggccaaggcgcgcggtcgggacggcgggaaacca
cgcaggaaatacggcggatga
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integrated database retrieval system
