Mycobacterium avium subsp. paratuberculosis E93: RE97_02360
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Entry
RE97_02360 CDS
T03847
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03420
Nucleotide excision repair
mavu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RE97_02360
03430 Mismatch repair
RE97_02360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_02360
Enzymes [BR:
mavu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE97_02360
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE97_02360
MMR (mismatch excision repair)
Other MMR factors
RE97_02360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJK78143
LinkDB
All DBs
Position
539493..541613
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AA seq
706 aa
AA seq
DB search
MDPMPTLADPLTAGLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAQLVAGGHVAAN
QVLAVTFTQRAAGEMRSRLRVLAAAAGTDAAVGSVSALTFHAAAHRQLRYFWPRVVGDTG
WQLLDSKFAVVARAASRTRINASTDDVRDLAGEIEWAKASLIGPEEYPAAVAAAGRDIPL
DAARVAGVYAAYEALKARGDHVTLLDFDDLLLHTAAAIENDPAVAEEFRDRYRCFVVDEY
QDVTPLQQRVLAAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDATVVRLERD
YRSTPQVVSLANQVIAAARGRVAGSKLHLVGQRPPGPVPTFHEHSDEPAEAAAVAKSIAR
LIESGTPASEIAVLYRVNAQSEIYEEALTEAGIPYQVRGGEGFFNRQEIKQALLALQRAA
EREGEDAREEPLPAVVRAVLEPLGLTAEEPVGTRARERWEALRALAELVDDEVARRPQLD
FAGLLTELRMRADARHPPVVQGVALASLHAAKGLEWDAVFLVGLADGTLPISHALAHGAD
SEAVEEERRLLYVGITRARTHLALSWALARSPGGRQSRKPSRFLNGIAPQTRAEAAPARS
RRNRSTATRCRICNNNLTTPAAVMLRRCETCAADIDEDLLVRLKAWRLDVAKEQKVPAYV
VFTDNTLIAIAELRPGDEQALIAIPGIGARKLEQYGPDVLELVRGR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaccccatgccaaccctcgccgatcccttgaccgccgggctggacgacgagcaacgc
gaagccgtgctggccccgcgcggcccggtctgcgtgctggccggcgccggcaccggcaag
acccgcaccatcacccaccggatcgcccagctggtcgcgggcggtcatgtcgccgccaat
caggtgctggcggtcaccttcacccagcgcgcggcgggggagatgcgctcgcggctgcgg
gtgctcgccgccgcggcgggcaccgacgcggcggtgggctcggtctcggcgctgaccttt
cacgccgccgcccaccggcagctgcgctatttctggccgcgggtggtcggcgacaccggc
tggcagctgctggacagcaagttcgcggtggtggcccgggcggccagccgcacccggatc
aacgccagcaccgacgacgtgcgcgacctggccggcgagatcgagtgggccaaggcgtcg
ctgatcggcccggaggaatacccggccgcggtggccgccgccgggcgggacattccgctg
gacgccgcgagggtcgccggcgtgtacgccgcctacgaagccctcaaggcccgcggcgac
cacgtcaccctgctcgatttcgacgacctgctgctgcacaccgcggcggcgatcgaaaac
gacccggcggtcgccgaggagttccgcgaccgctaccgctgcttcgtggtcgacgaatac
caggacgtcaccccgttgcagcagcgggtgctggccgcctggctgggcgatcgcgacgac
ttgaccgtggtgggggacgccaaccagaccatctactcgttcaccggggcctccccgagg
ttcctgctcgacttctcccgccggttccccgacgcgaccgtggtgcggctggaacgcgac
taccgctccaccccgcaggtggtgtcgctggccaaccaggtgatcgccgcggcccgcgga
cgggtggccggcagcaagctgcacctggtcgggcagcggccgccgggtccggtgccgacc
ttccacgagcactccgacgaaccggccgaggccgccgccgtcgccaaatcgattgcgcgg
ctgatcgaatcaggcacccccgcctcggagatcgcggtgctctaccgggtcaacgcccag
tcggagatctacgaggaggcgctgaccgaggccggcatcccctatcaggttcgcggcggc
gaggggttcttcaaccgccaggagatcaagcaggccctgctggcgctgcagcgcgccgcc
gagcgcgagggcgaagacgcccgagaagagccgctgcccgcggtggtgcgcgcggtgctg
gaaccgctggggctgacggccgaagagccggtcggcacccgggccagggagcgctgggag
gcgctgcgcgcgctggccgaactggtcgacgacgaggtggcgcggcgtccgcagctggac
ttcgccggcctgctgaccgaactgcggatgcgcgccgacgcccggcacccacccgtggtg
cagggcgtcgcgctggcgtcgctgcacgccgccaagggactcgagtgggacgcggtgttt
ctggtcggcctggccgacggcacgctacccatctcgcacgcgctggcgcacggcgccgac
agcgaggcggtcgaggaggagcggcggctgctctacgtcggaatcaccagggccagaaca
catttggcgctcagctgggcgttggcccgcagcccgggcgggcggcagagccgcaagccg
tcgcgattcctcaacggcatcgcaccccagacccgggccgaggcggcgccggccaggtcc
cgccgcaaccgcagcaccgccacccgctgccggatctgcaacaacaacctgaccaccccg
gcggccgtcatgctgcgacgttgcgagacgtgtgccgccgacatcgacgaggacctgctg
gtgcggctcaaggcgtggcggctggacgtcgccaaggaacagaaggtgcccgcctacgtc
gtgttcaccgacaacaccctgatcgccatcgccgagctgcggcccggcgacgaacaggcg
ctgatcgcgattcccggcatcggcgcgcgcaagctcgagcagtacggccccgacgtgctg
gagctggtccgcggtcgctga
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