Mycobacterium avium subsp. paratuberculosis E93: RE97_03990
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Entry
RE97_03990 CDS
T03847
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mavu03036
]
RE97_03990
Chromosome and associated proteins [BR:
mavu03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RE97_03990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
AAA_13
DUF937
Motif
Other DBs
NCBI-ProteinID:
AJK78429
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All DBs
Position
873879..877469
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AA seq
1196 aa
AA seq
DB search
MYLKSLTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSSRAPLGRAEVTVTIDNSDNALPIEYSEVSITRRMFRDGASEYEINGSSCR
LMDVQELLSDSGIGREMHVIVGQGKLDEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRK
LDAMSANLARLTDLTTELRRQLKPLGRQAEVARRAQTIQADLRDARLRLAADDLVNRRGE
REAIFEAEAAMRREHDEASARLAVASDELAAHEKALGELSGRAESVQQTWFALSALAERV
AATVRIASERAQHLDLEPVTTGDTDPDALEAEAERVAAAEQQLLAELATARSRLETARAE
LAEREREAAEADRAHMAAVRAEADRREGLARLAGQVETMRARVESIDDSVARLSERIEAA
AARAQQAKAEFETVQGRVGELDQGEVGLDEHHERTVAALRLADERVAELQAAERDAERKV
ASLRARIDALAVGLERKDGTAWLTENHSGAGILGPMAKLVKVRSGYEAAVAAVLGSAADA
LAADGLGAARSALGALKQADGGRAALVLGDWPADPPAPQPAPAGALWALDLIDAPERLRG
AITAMLSGVAVVDDLDRALALVAEHPRLRAVTLDGDLVGAGWVSGGSDRKLSTLEVTSEI
DKAGAELAAAEAQVAQLSAALSGALAEQAARQDSAEQALAALNESDSAISGMYEQLGRLG
QEARTSEDEWSRLLRQREELEAGRTQTVAEVTELENRLRNAQETPQEPAAEPVNRQQIAA
ATDAARSAEVEARLAVRTAEERANAVRGRADSLRRAAAAEREARVRAQQAREARLRAAAV
AAAVADSGRLLATRLNAVVAAASRIRDALAAERQQRATAMAAVRDEVNALSARVAALTDS
LHSDEVANAQAALRIEQLEQMVLEQFGMAPADLIAEYGPHIALPPSELEMAEYEQAKERG
EQVFAPAPIPFDRPTQERRAKRAERELAELGRVNPLALEEFAALEERYNFLSTQLEDVKA
ARKDLLGVVDEVDARILQVFSEAYTDVEREFSDVFGVLFPGGEGRLRLTDPSNMLTTGIE
VEARPPGKKITRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAALDDTNLRRLIS
LFELLRARSQLIIITHQKPTMEVADALYGVTMQGDGITAVISQRMRGQQVDQLVTT
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctcaagagtctgacgctgaagggcttcaagtcctttgcctcgccgacgactctg
cgtttcgagccgggcatcaccgcggtcgtcgggcccaacggctcgggcaagtccaacgtc
gtcgacgcgctggcctgggtgatgggcgagcagggggccaagacgctgcgcggcggcaag
atggaagacgtcatcttcgccgggaccagctcgcgcgcgccgctgggccgcgccgaggtc
accgtcaccatcgacaactccgacaacgcgttgcccatcgagtactccgaggtgtcaatc
acccggcggatgttccgcgacggcgccagcgagtacgaaatcaacggcagcagttgccgt
ttgatggacgtgcaggagctgctcagcgactccgggatcggccgggagatgcacgtcatc
gtcgggcagggcaagctcgacgagatcctgcagtcgcggcccgaggaccgtcgcgcgttc
atcgaggaagccgcgggggtgctcaagcaccgcaagcgcaaggaaaaggcgctgcgcaaa
ctcgacgcgatgtcggccaacctggcccggctcaccgacctgaccaccgagctgcgccgc
cagctcaaaccgctgggccgtcaggccgaggtggcccgtcgcgcgcagaccatccaggcc
gatctgcgcgacgcccggctgcggctggctgccgacgacctggtcaaccggcggggcgag
cgcgaggccatcttcgaggccgaggccgccatgcgccgcgagcacgacgaggcctcggcg
cggctggcggtggcctccgacgagctcgccgcgcacgagaaggcgctcggcgagctgtcc
ggccgggccgagtcggtccagcagacctggttcgcgctgtccgccctggccgaacgggtg
gcggcgacggtccgcatcgccagcgagcgggcccagcacctcgacctggagccggtgacc
accggcgacaccgaccccgacgcgctggaggccgaggccgagcgggtcgcggccgccgag
cagcagctgctggccgagctggccacggcgcgcagccggctggaaaccgcgcgcgccgaa
ctcgccgagcgggaacgcgaagccgccgaggccgaccgggcgcacatggcggcggtgcgg
gccgaggccgaccggcgcgagggactggcccggctggccggtcaggtcgagacgatgcgc
gcccgcgtcgagtcgatcgacgacagcgtggcgcggctgtccgagcgcatcgaggcggcc
gccgcccgcgcgcagcaggccaaggcggagttcgaaaccgtgcagggccgggtcggcgag
ctcgaccagggcgaggtgggcctcgacgagcaccacgagcgcaccgtcgccgcgctgcgt
ctggccgacgagcgggtggccgaactgcaggccgccgagcgtgacgccgaacgcaaggtg
gcctcgctgcgggcccgcatcgacgcgctggcggtggggctcgagcgcaaggacggcacc
gcctggctgaccgaaaaccattccggcgcagggattttgggaccgatggccaagctggtc
aaggtccgctccggctacgaagccgcggtggccgcggtgctgggctcggcggccgacgcg
ctggccgccgacgggctgggcgcggcccgctcggcgctgggtgcgctcaagcaggccgac
ggcggccgggccgcgctggtgctgggcgactggcccgccgatccgcccgcaccgcagccg
gccccggcgggcgcgctgtgggcgctcgacctcatcgacgcgcccgagcggctgcgcggg
gcgatcacggccatgctctccggcgtcgcggtggtcgacgacctggaccgggcgctggcg
ctggtggcggagcacccccggttgcgagcggtcacgctcgacggcgacctggtgggcgcc
ggctgggtcagcggcggctccgaccgcaaactgtccacgctggaggtgacctcggagatc
gacaaggccggcgcggagctggccgcggccgaggctcaggtggcccagctcagcgcggcg
ctgtccggcgcgctggccgaacaggccgcccggcaggattcggccgagcaggcgctggcc
gcgctgaacgagtccgacagcgcgatctccggaatgtacgagcagctgggccggctgggg
caggaagcccggacctccgaggacgagtggagccggttgctgcgccagcgcgaggagctc
gaggcgggccgcacccagaccgtcgccgaggtcaccgagctggaaaaccggctgcgcaac
gcgcaggaaaccccgcaggagccggccgcggaaccggtgaaccgccagcagatcgccgcg
gccaccgacgccgcgcgcagcgccgaggtggaggcccggctcgcggtgcgcaccgccgaa
gagcgggccaacgcggtgcgcgggcgggcggattcgctgcgccgggccgccgccgccgaa
cgggaggcccgggtgcgcgcccagcaggcccgcgaggcgcggctgcgcgccgcggcggtc
gcggcggcggtggccgattcggggcggttgctagcaacgcggttgaacgcggtggtggcc
gccgcgtcgcggatccgcgacgcgctggccgccgaacgccagcagcgcgccacggcgatg
gcggcggtgcgcgacgaggtgaacgcgctgagcgcccgggtagccgccctgaccgactcg
ctgcacagcgacgaggtggccaacgcccaggcggcgctgcgcatcgagcagctcgagcag
atggtgctcgagcagttcggcatggcgccggccgatctgatcgccgagtacggcccgcac
atcgcgctgccgcccagcgagctggagatggccgaatacgagcaggccaaggagcgcggc
gaacaggtcttcgcgcccgcaccgattcctttcgaccggcccacccaggagcggcgggcc
aagcgggccgagcgggagctggccgagctgggtcgggtcaacccgctggcgctggaggag
ttcgcggcgctcgaggagcgctacaacttcctgtccacccagctcgaggacgtcaaggcc
gcccgcaaggacctgctcggcgtggtggacgaggtcgacgcccgcatcctgcaggtgttc
agtgaggcctacaccgacgtcgaacgggaattctccgacgtgttcggcgtgctgttcccc
ggcggcgagggccggctgcggctgaccgatccgagcaacatgctgaccacgggcatcgag
gtggaggcccgcccgccgggcaagaagatcacccggctctcgctgctgtccggcggcgag
aaggcgctgaccgcggtggccatgctggtggccatcttccgggcccgcccgtcgccgttc
tacatcatggacgaggtggaggccgccctcgacgacaccaacctgcggcggctgatcagc
ctgttcgagctgctgcgggcgcgctcgcagctgatcatcatcacgcaccagaagccgacc
atggaggtcgccgacgcactctacggcgtcaccatgcagggcgacggcatcaccgcggtg
atctcgcagcggatgcgcggtcagcaggtggaccagctggtcaccacctga
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