Mycobacterium avium subsp. paratuberculosis E93: RE97_04470
Help
Entry
RE97_04470 CDS
T03847
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mavu03016
]
RE97_04470 (truB)
Enzymes [BR:
mavu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RE97_04470 (truB)
Transfer RNA biogenesis [BR:
mavu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RE97_04470 (truB)
Prokaryotic type
RE97_04470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJK78520
LinkDB
All DBs
Position
973954..974835
Genome browser
AA seq
293 aa
AA seq
DB search
MSPPGLVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVLGVERATKILGL
LTAAAKSYSATIRLGQATSTDDAEGDVARSVDARHLTSQAIEAAVGGLRGDIHQVPSTVS
AIKVAGKRAYKLVREGQAVELPARPVRIDRFEVRGLRAAGACVDVDVEVDCSSGTYVRAL
ARDLGAALGVGGHLTALRRTRVGRFGLEQAYGLDELAECPRLSYSLDEACLLIFGRRDLS
ADEAEAAGNGRALAAAGIDGVYAACAPDGRVIALLRDEGARTKSVVVLRPATL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagccctccgggcctggtcgtcgtcgacaagccggcgggaatgaccagtcacgacgtg
gtgggccggtgtcgccggatcttcgcgacccgacgggtggggcacgccgggacgctcgac
ccgatggccaccggcgtgctggtgctcggcgtcgagcgcgccaccaagatcctcggcctg
ctgaccgcggccgccaagtcgtactcggccaccatccggctgggccaggccacctccacc
gacgacgccgagggcgacgtggcgcgcagcgtcgacgcgcggcacctgacgagccaggcg
atcgaggcggcggtgggcgggctgcgcggcgacatccaccaggtgccctcgaccgtcagc
gcgatcaaggtggccggcaagcgggcctacaagctggtccgcgagggccaggccgtcgag
ctgccggcccgcccggtgcgcatcgaccggttcgaggtgcgcggcctgcgcgccgccggt
gcgtgcgtggacgtcgacgtcgaggtggactgctcgtcgggaacctacgttcgggcgctg
gcccgcgacctgggcgcggcgctgggggtgggcgggcatctgacggcgctgcggcgcacc
cgggtcgggcgcttcgggctcgagcaggcgtatgggctcgacgagctggccgagtgcccc
cggctgagctacagcctggacgaggcctgcctgctcatcttcgggcgccgcgatttgtcc
gccgacgaggccgaggccgccggcaacggccgggccctggcggcggccgggatcgacgga
gtgtatgccgcctgcgcccccgacggccgggtgatcgcgctgctgcgcgacgagggcgcg
cggaccaagtccgtggtggttttgcgcccggcgacgctttag
DBGET
integrated database retrieval system
