Mycobacterium avium subsp. paratuberculosis E93: RE97_05545
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Entry
RE97_05545 CDS
T03847
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu00260
Glycine, serine and threonine metabolism
mavu00460
Cyanoamino acid metabolism
mavu00630
Glyoxylate and dicarboxylate metabolism
mavu00670
One carbon pool by folate
mavu00680
Methane metabolism
mavu01100
Metabolic pathways
mavu01110
Biosynthesis of secondary metabolites
mavu01120
Microbial metabolism in diverse environments
mavu01200
Carbon metabolism
mavu01230
Biosynthesis of amino acids
mavu01240
Biosynthesis of cofactors
mavu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RE97_05545
09102 Energy metabolism
00680 Methane metabolism
RE97_05545
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RE97_05545
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RE97_05545
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RE97_05545
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RE97_05545
Enzymes [BR:
mavu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RE97_05545
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
SelA
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
AJK78709
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Position
1166338..1167618
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AA seq
426 aa
AA seq
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MSAPLADIDPDIAGLLGQELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRR
YYGGCEYVDVVENIARDRAKALFDADFANVQPHSGAQANAAVLHALMTPGERLLGLDLAN
GGHLTHGMKLNFSGKLYDVGFYGVDPTTHLIDMDAVRAKALEFRPKVIIAGWSAYPRVLD
FAAFASIADEVGAKLWVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGPRSGLILGK
QEYAKSINSAVFPGQQGGPLMHVIAAKAVALKIAGTEEFADRQRRTLSGARILAERLSGA
DVAAAGVSVVSGGTDVHLVLVDLRNSELDGQAAEDLLHEIGITVNRNAVPNDPRPPMVTS
GLRVGTPALATRGFGGAEFSEVADVIATALAGGRGADLAALRDRVTRLARDFPLYEGLED
WALVGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccgctcgccgacatcgaccccgacatcgccgggttgctgggtcaggagctg
ggccgccagcgcgacacgctggagatgatcgcctcggagaacttcgtcccgcgcgcggtg
ctgcaggcccagggcagcgtgctgaccaacaagtacgccgaggggctgcccggccgccgc
tactacggcggctgcgagtacgtcgacgtggtggagaacatcgcccgggatcgggccaag
gccctcttcgacgccgacttcgccaacgtgcagccgcattcgggtgcccaggccaacgcg
gccgtgctgcacgcgctgatgacgccgggggagcggctgctgggtctggacctggccaac
ggcgggcacctgacgcacggcatgaagctgaacttctccggcaagctctacgacgtcggc
ttctacggcgtcgacccgaccacgcacctgatcgacatggacgcggtgcgggccaaggcc
ctcgagttccgtcccaaggtcatcatcgccggctggtcggcctacccgcgggtgctggac
ttcgcggcgttcgcgtcgatcgccgacgaggtcggcgccaagctgtgggtcgacatggca
cacttcgcgggcctggtcgccgccgggctgcacccgtccccggttccgcacgccgacgtg
gtgtccaccaccgtgcacaagacgctcggcggcccgcgctccggcctgatcctgggcaag
caggagtacgccaagtcgatcaactccgcggtgttccccggccagcagggcgggccgctc
atgcacgtcatcgccgccaaggccgtcgcgctcaagatcgccggcacggaagagttcgcc
gaccggcagcggcgcaccctgtccggggcgcgcatcctcgccgagcggctgtcgggcgcc
gacgtggcggccgccggcgtgtcggtggtcagcggcggcaccgacgtccacctggtgctg
gtcgacctgcgcaactcggagctcgacggccaggccgccgaggacctgctgcacgagatc
ggcatcaccgtgaaccgcaacgccgtgcccaacgatccccggccgccgatggtcacctcc
gggttgcgggtgggcacgccggccctggccacccggggcttcgggggcgccgagttcagt
gaggtcgccgacgtcatcgccaccgcgctggcgggcggccgcggggccgatctggcggcg
ctgcgggaccgggtcacccggctggccagggatttcccgctgtacgagggcctcgaagac
tgggcgctggtcggccggtag
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