Mycobacterium avium subsp. paratuberculosis E93: RE97_06690
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Entry
RE97_06690 CDS
T03847
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu00300
Lysine biosynthesis
mavu00470
D-Amino acid metabolism
mavu01100
Metabolic pathways
mavu01110
Biosynthesis of secondary metabolites
mavu01120
Microbial metabolism in diverse environments
mavu01230
Biosynthesis of amino acids
Module
mavu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RE97_06690
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RE97_06690
Enzymes [BR:
mavu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RE97_06690
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJK78905
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All DBs
Position
1424218..1425636
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AA seq
472 aa
AA seq
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MNVHPAGPRHAEETRHPESPPRPQSPEELLLLAPNVWPRNATRNEAGVATIAGVAVTELA
REYGTPLFVVDEDDFRSRCREIASAFGGGNNVHYAAKAFLCSEVARWIDEEGLSLDVCTG
GELAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIV
QDVFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIG
SQIFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADDPPPMGEL
AGKLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSV
DGGMSDNIRTALYDAQYDARLVSRVSDAPAELARVVGKHCESGDIVVRDTWVPGDLRPGD
LIGVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLSLEVR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtccaccccgccggtcctcggcatgccgaagagacccgccaccccgaaagcccg
ccgcgcccgcagtctcccgaggagctgttgctgctcgcgccgaatgtgtggcctcgcaac
gcaactcgcaacgaggccggcgtcgcgaccatcgccggggtcgcggtgaccgagctggcc
cgcgagtacggcaccccgctgttcgtcgtcgacgaggacgactttcggtcccgctgccgc
gagatcgcgtcggccttcggcggcggcaacaacgtgcactatgccgccaaggccttcctg
tgcagcgaggtggcccgctggatcgacgaggaaggcctgtcactcgacgtgtgcaccggc
ggggaactggccgtcgccctgcacgccgacttccctccggagcgaatcaccttccacggc
aacaacaaatctgtcgcggagctgacggccgcggtcaaagccggtgtggggcatgtcgtt
ttggactcgatgaccgagatcgagcggctggacgccatcgcggccgacgcgggcatcgtc
caggacgtcttcgtgcgtctcaccgtcggtgtggaggcccacacccacgagttcatctcc
accgcgcacgaggaccagaagttcgggctgtccgtggccagcggtgcggcgctggccgcc
gtcggccgggttttcgacaccgaacacctgcggctggtcggcctgcacagccacatcggt
tcgcagatcttcgacgtcgccggcttcgaactcgccgcgcgccgcgtcatcggcttgctg
cacgacgcggtcgagcagttcggcgtcgagaaaacagcgcagatagccaccgtggatctc
ggtgggggacttggcatttcgtacctagccgcggacgatccgccgccgatgggtgagctg
gcgggcaagctgagcgcgatcgtgcagcacgagtccgcggcggtggggctgccgacaccg
cggctggtggtcgagccgggacgggccatcgctggccccggcacgatcaccctctacgag
gtgggcaccgtcaaggacgtcgacgtgagcgccaccgcgcaccggcgctacgtgagcgtg
gacggcggcatgagcgacaacatccgcaccgcgctgtatgacgcccagtacgacgcccgg
ctggtctcccgggtcagcgatgcacccgccgagttggcccgggtcgtcggaaagcattgc
gagagcggcgatatcgtggttcgagacacctgggtccccggcgatctgaggcccggcgac
ctgatcggggtggccgccaccggcgcctactgttattcgctgtcgagtcggtacaacatg
gtctgccgcccggccgtcgtcgcggtgcgtgacggccgcgcgcgtctggtgctgcgccgc
gagacggtcgacgatctactgagtctggaagtgaggtga
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