Mycobacterium avium subsp. paratuberculosis E93: RE97_06835
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Entry
RE97_06835 CDS
T03847
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RE97_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mavu03000
]
RE97_06835
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_06835
Enzymes [BR:
mavu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RE97_06835
Transcription factors [BR:
mavu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RE97_06835
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RE97_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AJK78929
LinkDB
All DBs
Position
complement(1453287..1454810)
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AA seq
507 aa
AA seq
DB search
MHDDFERCYRAVQSKDARFDGWFVTAVLTTGIYCRPSCPVRPPFARNVRFYPTAAAAQRA
GFRACKRCRPDASPGSPEWNVRGDVVARTMRLIADGTVDRDGVGGLAARLGYTTRQLERL
LQAEVGAGPLALARAQRAQTARVLIETTELPFGDVAFAAGFSSIRQFNDTVRAVFESPPS
VLRRRASARCASAANSPGAVCLRLPVRTPFGFHGVFGHLAASVVPGCEEVRDGAYRRTLR
LGFGTGIVTLTPAADHVRCELVLDDFRDLTAAIARCRRLLDLDADPEAVDEALAADPQLA
PAVRKAPGQCIPRTVDEAELAVRAVLGQQVSIRAARTHAGRLVAAYGRAVHDPEGTLTHT
FPSVQQLADVDPIHLAVPKARQRTLAALVAGLADRSIVLDTGCDWQSARTQLLALPGVGP
WTAEVIAMRGLGDPDAFPAADLGLRVAAKRLGLPSGQRSLTAASARWRPWRSYATQYLWT
TLEHPVNHWPPQQPSKGILNDVVKPPR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgacgatttcgaacgctgctaccgcgccgtccagtccaaggatgcgcggttcgac
ggctggttcgtcaccgccgtgctgaccaccggaatctactgccggcccagttgcccggtg
cgcccgccgttcgcccgtaatgtgcggttttatccgaccgcggcggccgctcagcgcgcc
ggcttccgggcctgcaagcggtgccgtcccgacgcctcgccgggatcgccggaatggaac
gtgcgcggcgacgtggtggcgcgcacgatgcggctgatcgccgacggcacggtggaccgc
gacggtgtcggcggcctggccgcccggctgggctacaccacccggcagctggagcggttg
ctgcaggcggaggtcggcgccggtccgctcgcgctggcccgggcgcaacgcgcccagacg
gcgcgggtgctgatcgagaccacggagctgcccttcggcgacgtggcattcgccgccggc
ttctccagcattcgtcagttcaacgacaccgtgcgcgcggtgttcgaaagcccgccgagc
gtgctgcgccggcgcgcctcggcgcgctgcgcatccgcggccaattcgcctggcgccgtg
tgccttcggctgccggtccgcacacccttcggcttccatggcgtcttcggtcacctcgcc
gcgagcgtcgttcccgggtgcgaggaggtccgcgacggcgcctaccgacgcacgctgcgg
ctggggttcggcaccggcatcgtcacgttgacccccgccgccgaccacgtccgttgcgag
ctggtgctcgacgacttccgggacctgacggcggcgatcgcccgttgccggcggctgctg
gatctcgacgccgaccccgaagcggtggacgaggcgctggccgccgacccgcagctcgcc
ccggcggtgagaaaggcgcccggccaatgcattccgcgcaccgtcgacgaggccgagctc
gcggtacgcgccgtgctgggccagcaggtgtccatccgggcggcgcgcacccatgcgggg
cgtttggtcgccgcctacggccgggcggtccacgaccccgagggaaccttgacccacacc
ttcccgtcggtgcagcagctggccgacgtcgaccccatccatctggcggtgcccaaggcc
cggcagcgcacgctggccgcgctggtcgccggcctcgccgaccgcagcatcgtcctggat
accgggtgcgactggcaaagcgcccgaacgcaattgctggcattaccgggagtcggcccg
tggaccgcggaagtcattgcgatgcgcggcctgggcgatcccgatgcgttcccggccgcc
gacctgggtctgcgcgtcgcggccaaacggctcggattgccgtcgggccagcggtcgctg
accgctgccagcgcacgctggcggccctggcgttcctatgccacgcaatacctttggacc
actctcgagcatccggtgaaccattggccaccgcagcagccatcgaaggggattctcaat
gacgttgtcaagccgccgcggtag
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