KEGG   Mycobacterium avium subsp. paratuberculosis E93: RE97_06900
Entry
RE97_06900        CDS       T03847                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
mavu  Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:mavu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mavu03400]
    RE97_06900
Enzymes [BR:mavu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     RE97_06900
DNA repair and recombination proteins [BR:mavu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RE97_06900
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII Apolipoprotein DEAD_2 Mpt_N TPP_enzyme_N Alpha-E SecA_DEAD HEAT Asparaginase_C
Other DBs
NCBI-ProteinID: AJK78939
LinkDB
Position
complement(1470328..1472340)
AA seq 670 aa
MVTSELSVPELLATAVAALGGSEREGQQQMAAAVAQAFDTGRHLVVQAGTGTGKSLAYLV
PAIVHALRDDSPVVVSTATIALQRQLVDRDLPRLIDSLAAALPRRPQFALLKGRRNYLCL
NKIHNGGPADGEEAADRPQEELFNPMAVSALGRDVQRLTEWASSTDSGDRDDLKPSVPDR
SWSQVSVSARECLGVARCPFGAECFSERARSRAGQADVVVTNHALLAIDAVSDSAILPEH
ALLVIDEAHELVDRVTAVATAELTSAALGVAARRIGRLVSPELVQRLEATTATFAAAIHD
GTPGRIDRLDDELATYLAALRDAASAARSAIDTTSDPKAASARAEAVAALSEISDTASRV
LASFGPAIPDRTDVVWLDHEDNRGAMRPVLRVAPLSVADLLRDRVFSRSTVVLTSATLTI
GGSFDAMAAAWGLKGPDGDDPPWRGLDVGSPFQHAKAGILYVAAHLPPPGRDGVGSAEQL
TEIAELITAADGRTLGLFSSMRAARAAAEAMRDRLSTPVLCQGDDSTSALVEQFSAEPQT
SLFGTLSLWQGVDVPGPSLSLVLIDRIPFPRPDDPLLGARQRAVAARGGNGFMAVAASHA
ALLLAQGSGRLLRRVSDRGVVAVLDSRMATAGYGGYLRASLPPFWQTTNGAQVRAALQRL
RTAATASGPG
NT seq 2013 nt   +upstreamnt  +downstreamnt
atcgtcacgtccgagctttccgtgcccgagttgctggccaccgccgtggccgcgctgggc
ggcagcgagcgcgaaggccagcagcagatggccgccgcggtggcccaggccttcgacacc
ggccggcacctggtcgtgcaggccggcaccggcaccggcaagtcgctggcgtatctggtg
cccgcgatcgtgcacgccctgcgcgacgactccccggtggtggtgtcgacggccaccatc
gcgttgcagcgccagctcgtcgaccgcgacctgccccggctgatcgactcgctggccgcg
gcgctgccgcggcggccccagttcgcgttgctcaagggacgacgaaactatttgtgcttg
aacaagattcacaacggcgggccggccgacggtgaggaagccgccgaccggccgcaggag
gaactgttcaacccgatggcggtcagcgcgttgggccgcgacgtgcaacggctcaccgaa
tgggcgtcgagcaccgactccggtgaccgcgacgacctcaagcccagcgtgccggaccgg
tcctggtcgcaggtcagcgtttcggcgcgggaatgcctcggggtggcgcgctgtccgttc
ggcgccgaatgcttctccgagcgcgcgcgcagccgggccggtcaggccgatgtcgtggtc
accaaccacgcgctgctggccatcgacgcggtgtccgactcggcgatcctgcccgagcac
gcgctgctggtcatcgacgaggcgcacgagctggtggaccgggtgaccgcggtggccacc
gcggagctgacgtcggcggccctcggcgtcgccgcgcgccggatcggccggctggtgagc
ccggaactggtccagcggctggaggcgacgacggcgaccttcgccgcggccatccacgac
ggcacgccggggcgcatcgatcgcctcgacgacgagctggcgacctacctggcggcgctg
cgcgacgcggcgagcgcggcccgctcggcgatcgacaccaccagcgaccccaaggcggcg
tccgcgcgcgccgaagcggttgcggcactgagcgagatctccgacaccgcgtcgcgggtg
ctggcgtcgttcggcccggccatccccgaccgtaccgatgtggtgtggctggaccacgag
gacaaccggggcgcgatgcgcccggtgctgcgggtggccccgctgtcggtggccgacctg
ttgcgcgaccgggtgttctcgcgttccaccgtggtgctgacgtcggcgacgctgaccatc
ggcggctccttcgacgccatggccgctgcctgggggctgaaaggacccgacggtgacgac
ccgccctggcgcggcctggacgtggggtcgccgtttcagcacgccaaggccggaatcctt
tacgtggcagcgcatctgccgccgcccggacgcgacggcgtcggctcggccgagcagctg
accgagatcgccgagctcatcaccgccgccgacgggcgcaccctgggcctgttctcgtcg
atgcgggccgcccgggcggccgccgaggcgatgcgcgaccggctgtcgacgccggtgctg
tgtcagggcgacgacagcacctcggcgctggtcgagcagttcagcgccgagccgcagacg
tcgctgttcggcaccctgtcgctgtggcagggcgtcgacgtgcccggcccgtcgctgtcg
ttggtgttgatcgaccgcatcccgtttccccggcccgacgacccgctgctcggggcgcgg
cagcgcgcggtggccgcgcgcggcggcaacggcttcatggccgttgccgccagccatgcc
gcgctgctgctggcgcagggctcgggccggctgttgcggcgggtcagcgaccgcggcgtg
gtcgcggtgctcgactcgcgcatggccaccgccggctacggcggctacctgcgcgcctcg
ctgccgccgttctggcagaccaccaacggcgcgcaggtgcgggcggcgctgcagcggctg
cgcaccgccgcgacggctagcgggccagggtga

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