Mycobacterium avium subsp. paratuberculosis E93: RE97_10560
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Entry
RE97_10560 CDS
T03847
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu00071
Fatty acid degradation
mavu00280
Valine, leucine and isoleucine degradation
mavu00310
Lysine degradation
mavu00362
Benzoate degradation
mavu00380
Tryptophan metabolism
mavu00410
beta-Alanine metabolism
mavu00640
Propanoate metabolism
mavu00650
Butanoate metabolism
mavu00907
Pinene, camphor and geraniol degradation
mavu00930
Caprolactam degradation
mavu01100
Metabolic pathways
mavu01110
Biosynthesis of secondary metabolites
mavu01120
Microbial metabolism in diverse environments
mavu01200
Carbon metabolism
mavu01212
Fatty acid metabolism
Module
mavu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RE97_10560
00650 Butanoate metabolism
RE97_10560
09103 Lipid metabolism
00071 Fatty acid degradation
RE97_10560
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RE97_10560
00310 Lysine degradation
RE97_10560
00380 Tryptophan metabolism
RE97_10560
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RE97_10560
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RE97_10560
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RE97_10560
00930 Caprolactam degradation
RE97_10560
Enzymes [BR:
mavu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RE97_10560
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RE97_10560
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RE97_10560
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
F420_oxidored
DAO
ApbA_C
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AJK79571
LinkDB
All DBs
Position
complement(2309133..2311265)
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AA seq
710 aa
AA seq
DB search
MSDSIIGWDKDADGIVTLTIDDPDNSANMLTDAYVEQMGAMIDRLEAEVDETTGVVITSG
KSTFFAGADLTQIRSAGPEHAQQLFDGSTAIKRDLRRLETLGKPVVAAINGAALGGGLEL
ALATHHRIAANVAGSVIGLPEVMLGVLPGAGGVARSVRLLGIQNALMQVLLTGNRFKPAK
AQQVGLVDELVESVDELVPAAKAWILANPGKHVQPWDVPGFEIPGGSPSTPAFAANLPAF
PANLRKQLKGSPMPAPRAIMAAALEGAQVDFDTAQLIETRYFVNLVTGPIAKNMIQAFFF
DLQAVQSGTSRPADAPERTIHKVGILGAGMMGAGIAYVTAKAGIDVVLKDVTLQAARKGK
AYSENLEQKALAKGRTTEAKSRALLDRITPTADAADFTGVDFVIEAVFENTELKNKVFAE
IENIVEPGAVLGSNTSSLPITELAAGVSRPENFVGIHFFSPVEKMDPIEIIRGAKTSDET
LARVIDYTLAINKYPIVVNDGRGFFTTRVFSTYLLEAFNMLAEGIDPATIEQAALQAGYP
AGPLQVADELSFGTIRKIMDETVQAAKADGVALDESVRVAAEVVTTLMDTFDRTGKKGGA
GFYDYVDGTRAGLWDDLRKAFNTTRALSVPFDDLQDRYLFIQAIETQKAYDDGVISSDPD
ANIGSIFSIGYPPWTGGVRQFVTGYPGGIDAFRRRADELAARYGGRFRWI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacagcattattggctgggacaaggacgccgacgggatcgtcacgctgacgatc
gacgaccccgacaacagcgccaacatgctcaccgatgcctacgtcgagcagatgggcgcg
atgatcgaccggctcgaggccgaggtcgacgagaccaccggtgtggtgatcacctcgggt
aagtccacgtttttcgccggcgccgatctgacccagatccgcagcgccggacccgagcac
gcgcagcaactgttcgacggctccacggcgatcaaacgtgatctgcgtcggctggagacg
ctgggcaaaccggtcgtcgccgcgatcaacggcgccgcgttgggcggcgggctggagctg
gcgctggccacccatcaccgcatcgcggccaacgtggcgggcagcgtgatcggtctgccc
gaagtgatgctgggtgtgctacccggcgccggcggcgtggcgcgcagcgtgcggctgctc
ggcatccaaaacgcgctgatgcaggtgttgttgaccggcaaccgattcaagcccgccaag
gcccaacaggtcggcctcgtcgacgaactggtcgagtccgtcgacgaattggtgccggcc
gccaaggcgtggatcctggccaacccgggcaagcatgtgcagccgtgggacgttccgggt
ttcgagattcccgggggcagcccgtccacaccggcgtttgcggccaacctgccggcgttc
ccggccaacttgcgcaagcagctcaagggctcgccgatgccggcgccgcgagcaatcatg
gcggccgcactcgaaggggcccaggtcgacttcgacaccgcccagctcatcgagacgcgc
tacttcgtcaacctggtcaccggcccgatcgccaagaacatgattcaggcgttcttcttc
gatctgcaggccgtgcagagcgggacgtcgcgccccgccgatgcgcccgagcgcacaatc
cacaaggtcggcatcctgggcgcgggcatgatgggcgccgggatcgcatatgtcacagcg
aaagccggcatcgacgtcgtcctcaaagacgtcacgctgcaggcggcccgcaagggcaag
gcgtattcggaaaacctcgagcagaaggcattggcgaaaggccgtaccaccgaggcgaag
tcgcgggcgctgctggaccgcatcaccccgaccgccgacgccgccgacttcaccggcgtg
gatttcgtgatcgaggcggtgttcgaaaacaccgagctgaagaacaaggtgttcgccgag
atcgagaacatcgtcgaacccggcgccgtgctgggctccaacacctcgtcgctgccgatc
accgagctggccgccggggtgagtcgcccggagaacttcgtcggcatccacttcttctca
ccggtggaaaagatggacccgatcgagatcatccgcggcgcaaagacatccgacgagacc
ctggcccgggtcatcgactacacgctggccatcaacaagtaccccatcgtggtcaacgac
ggccgcgggttcttcaccacccgggtgttctccacctacctgctcgaggccttcaacatg
ctcgccgaaggcatcgacccggccaccatcgaacaggcggcgcttcaggccggctacccg
gccgggccgctgcaagtggccgacgagctcagcttcggcaccatccgcaagatcatggat
gagacggtgcaggcggccaaggccgacggcgtggcgctcgacgagtcggtgcgcgtggcc
gccgaggtggtcaccacgctgatggacacgttcgaccgcaccggcaaaaagggcggcgcg
ggtttctacgactacgtcgacggcacccgcgccgggttgtgggacgatctgcgaaaggca
ttcaacaccacacgcgcactgtcggttccgttcgacgacctgcaggaccgctacctgttc
atccaggcgatcgaaacgcaaaaggcttacgacgacggcgtcatcagctccgacccggac
gccaacatcggctcgatcttcagcatcggctacccgccgtggaccggcggagtgcgccag
ttcgtcaccggctatccgggcgggatcgatgcgttccgccggcgcgccgatgaactcgcc
gcaaggtatggagggcgattccgatggatctga
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