Mycobacterium avium subsp. paratuberculosis E93: RE97_12560
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Entry
RE97_12560 CDS
T03847
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RE97_12560 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mavu03011
]
RE97_12560 (rpsA)
Ribosome [BR:
mavu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RE97_12560 (rpsA)
Bacteria
RE97_12560 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF2110
SOGA1-2-like_CC
EFTUD2
Motif
Other DBs
NCBI-ProteinID:
AJK79931
LinkDB
All DBs
Position
complement(2764304..2765746)
Genome browser
AA seq
480 aa
AA seq
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MPSPAVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE
GVIPARELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALK
EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR
NNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGK
VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL
SLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDPETNEWLEGFEKQRAEWEARYAE
AERRHKMHTAQMEKFAAAEAAGHAGGEQSPGNGAPAEKAGGSLASDAQLAALREKLAGNA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcccgccgtcacctcgccccaagtagccgtcaacgacattggctccagcgag
gactttctcgccgcaatcgacaaaacgatcaagtacttcaacgatggcgacatcgtcgag
ggcacgatcgtcaaagtggaccgggacgaggtgctcctcgacatcggctacaagaccgaa
ggggtcatccccgcccgcgagctctccatcaagcacgacgtcgaccccaacgaggtcgtt
tccgtgggagacgaggtggaagccctggtcctcaccaaggaggacaaagagggccgcctg
atcctgtccaagaagcgcgctcagtacgagcgcgcctggggcaccatcgaggcgctcaag
gagaaggacgaggccgtcaagggcaccgtcatcgaggtggtcaagggtggcctgatcctc
gacatcggcctgcgcggcttcctgcccgcctcgctggtcgagatgcgccgggtccgcgat
ctgcagccctacatcggcaaggagatcgaggccaagatcatcgagctggacaagaaccgc
aacaacgtggtgctgagccgccgcgcctggctggagcagacccagtccgaggtgcgcagc
gagttcctcaaccagctgcagaagggcgccatccgcaagggtgtggtctcctccatcgtc
aacttcggcgcgttcgtcgacctgggcggtgtggacggcctggtgcacgtctccgagctc
tcctggaagcacatcgaccacccgtccgaggtggtgcaggtgggcgacgaggtcaccgtc
gaggtgctcgacgtcgacatggaccgcgagcgggtttcgttgtcgctcaaggcaactcag
gaagacccgtggcgccacttcgcccgcacccacgccatcggccagatcgtgcccggcaag
gtcaccaagctggttccgttcggcgcgttcgtgcgcgtcgaggagggcatcgagggtctg
gtgcacatctccgagctggccgagcgccacgtcgaggtgcccgaccaggtggtcgcggtc
ggcgacgacgcgatggtcaaggtcatcgacatcgacctggagcggcgccggatctcgttg
agcctcaagcaggccaacgaggactacaccgaggagttcgaccccgccaagtacggcatg
gccgactcctacgacgagcagggcaactacatcttccccgagggcttcgaccccgaaacc
aacgaatggctcgagggattcgagaagcagcgcgccgagtgggaggcccgctacgccgag
gccgagcgccggcacaagatgcacaccgcgcagatggagaagttcgccgcggccgaggcg
gccgggcacgccggcggcgagcagtcgcccggcaacggcgcaccggcggagaaggcgggc
ggttcgctggccagcgacgcccaactggccgcgctgcgggaaaagctcgccggcaacgcc
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