Mycobacterium avium subsp. paratuberculosis E93: RE97_14755
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Entry
RE97_14755 CDS
T03847
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03420
Nucleotide excision repair
mavu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RE97_14755
03430 Mismatch repair
RE97_14755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_14755
Enzymes [BR:
mavu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE97_14755
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE97_14755
MMR (mismatch excision repair)
Other MMR factors
RE97_14755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
OstA_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJK80314
LinkDB
All DBs
Position
complement(3256863..3259187)
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AA seq
774 aa
AA seq
DB search
MSVHVTDAKPVSEAEQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRVAYLIAA
RGVGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPAAAVANLTDGSD
ELSRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQD
TNHAQYVLVRELVGTDTEDGVPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDATTI
LLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVGYVADNEHDEARFVAEEI
DALAQKGEITYNDVAVFYRTNNSSRSFEEVFIRAGIPYKVVGGVRFYERKEIRDIIAYLR
VLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPMLNSRA
EKAIAGFVELLDDLRGRLDDDLGDLVESVLERTGYRRELESSTDPQELARLDNLNELVSV
AHEFSTDRANAAALDESLDAADDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAGMVTLMT
LHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPVELSEERRLAYVGITRARQRLYLSRAIVR
SSWGQPMLNPESRFLREIPQELIEWRRTAPAPSFSAPVSGAGRFGTPRAAPTRAAMSKRP
LLVLAPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSSGRVKLMHNHAPISKL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgtaacagatgccaagccggtctccgaagccgagcaattgctcgagggg
ctcaatccgcaacagcgccaggccgtggtgcacgagggttcgccgctgctgatcgtcgcc
ggggcgggttcggggaagacggcggtgctgacccgccgcgtcgcctacctgatcgcggcc
cgcggggtcggggtgggccaggtgctggccatcaccttcaccaacaaggccgccgccgag
atgcgggaacgggtggtgcggctggtgggcaaccgggcccgcgccatgtgggtgtccacc
tttcattcgacctgcgtgcgcatcctgcgcaaccaggcgtcgctgatcgagggcctcaat
tccaacttctcgatctacgacgccgacgactcgcggcggctgctgcagatgatcggccgc
gacatgggcctggacatcaagcgctactcgccgcggctgttggccaacgcgatctccaac
ctgaagaacgagctgatcgaccccgccgcggcggtcgccaacctcaccgacggttccgac
gagttgtcccgcaccgtggcaagcgtctacggcgaataccagcgccggctgcgggcggcc
aacgcgctggacttcgacgacctgatcggcgagacggtggcggtgctgcgggccttcccg
cagatcgcccagcactaccggcggcggttccggcacgtgctcgtcgacgagtaccaggac
accaaccacgcgcagtacgtgctggtgcgcgagttggtgggcaccgacaccgaggacggc
gttccccccggcgagctgtgcgtggtcggcgacgccgaccagtcgatctatgccttccgc
ggcgccaccatccgcaacatcgaggacttcgaacgcgactacccggacgcgacaaccatt
ctgctggaacagaattaccgctcgacacagaacatcctgtcggcggccaactcggtgatc
gcgcgtaactccggtcgccgcgacaagcggctgtggaccgacgccggcgccggcgagctg
atcgtcggctacgtcgccgacaacgagcacgacgaggcccgcttcgtcgccgaggagatc
gacgcgctcgcgcagaagggcgagatcacctacaacgacgtcgccgtcttctaccgcacc
aacaactcgtcgcggtccttcgaggaggtgttcatccgcgccgggatcccctacaaagtc
gttgggggagtgcgcttttacgagcgcaaggagatccgcgacatcattgcctacctgcgg
gtgctggacaaccccggcgacgcggtgagcatgcggcgcatcctcaacaccccgcgccgg
gggatcggtgatcgggccgaggcctgcgtggcggtgtacgccgagaacaccggtgccagt
ttcgccgacgcgctggtggccgcggccgaaggcaaagtgccgatgctgaattcgcgcgcg
gagaaggcgatcgcgggtttcgtcgagttgctggacgacctgcgcggccggctggacgac
gatctcggcgacctggtcgagtcggtgctcgaacgcaccggctaccgccgggagctggaa
tcgtccaccgatccccaagagctggcgcgtctggacaacctcaacgaactcgtcagcgtc
gcacacgaattcagcaccgaccgggcgaacgccgccgcgctggacgagtcgctggatgcc
gcggacgacgaagacgtgcccgacaccggtgtgctggccgagttcttggaacgggtctcg
ctggtctccgacagcgacgagatccccgaggacggcgccgggatggtcacgctgatgacc
ctgcacaccgcgaagggcctggagttcccggtggtgttcgtcaccggctgggaggacggg
atgttcccgcacatgcggtcgctggacgatccggtcgaactctccgaggagcggcggctg
gcctacgtgggcatcacccgggcccggcagcggctctacctgagccgggccatcgtccgc
tcgtcgtggggccagcccatgctcaacccggaatctcggttcctgcgggagattccgcag
gaactgatcgagtggcggcgcaccgcgccggcgccgtcgttcagcgcaccggtcagcggc
gccggccggttcggcaccccgcgggcggccccgacccgcgccgcaatgagcaaacggccg
ctgctggtgctggcgccgggcgaccgggtgacgcacgacaagtacgggctcggccgggtc
gaggaggtgtccggcgccggcgagtcggcgatgtcactgatcgacttcggcagctccggg
cgggtgaagctgatgcacaaccacgccccgatcagcaagctctaa
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