Mycobacterium avium subsp. paratuberculosis E93: RE97_14845
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Entry
RE97_14845 CDS
T03847
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RE97_14845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_14845
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RE97_14845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Etmic-2
Motif
Other DBs
NCBI-ProteinID:
AJK80330
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All DBs
Position
3279617..3280525
Genome browser
AA seq
302 aa
AA seq
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MRSIWKGSIAFGLVNVPVKVYSATEDHDIKFHQVHAKDNGRIRYQRVCELDGEVVEYRDI
ARAYESDDGQMVIITDDDIATLPEERSREIEVLEFVPANEVDPMLFDRSYFLEPDSKSSK
SYVLLAKTLAETDRMAIVHFTLRNKTRLAALRVKDFGKRDVMVIHTLLWPDEIRDPDFPI
LDKKVEIKPAELKMAGQVVESMAEDFNPDRYHDDYQEQLHELVQAKLEGGEAFTTEEQPK
QLDETEDVSDLLAKLEASVKARSGDGKAPAKKSPAKKTAAKKAPAKKGAAKKAPAKKAAS
RS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccatctggaagggttccatcgcgttcgggctggtgaacgtcccggtcaaggtg
tacagcgcgaccgaagaccacgacatcaagttccaccaggtacacgccaaggacaacggc
cgtatccggtaccagcgggtgtgcgagctggacggggaggtcgtcgagtaccgcgacatc
gcccgggcctacgaatccgacgacggccagatggtaatcatcactgacgacgacatcgcc
accttgcccgaagaacgcagccgcgagatcgaggtgctcgagttcgtcccggccaacgag
gtggacccgatgctgttcgaccgcagctattttctggagccggattcgaagtcctcgaaa
tcgtatgtgctgcttgccaaaaccctcgcggagacggaccggatggcgatcgtgcatttc
acgttgcgcaacaagacgcggctggcggccttgcgggtcaaggacttcggcaagcgcgac
gtgatggtgatccacaccttgttgtggcccgacgagatccgcgacccggacttccccatc
ctggacaagaaggtcgagatcaagccggccgaactgaagatggccggccaggtggtggag
tcgatggccgaagacttcaaccccgaccgctaccacgacgactaccaggaacagctgcac
gagctggttcaggccaaactcgaaggcggagaagcgtttaccaccgaggagcaacccaag
caactggacgagaccgaggacgtctccgatctgctggcaaagctggaggccagcgtgaag
gcccgctcgggggacggcaaagcgccggcgaagaagtcgcccgccaagaagaccgccgcc
aagaaggcacccgcgaagaagggcgcggccaagaaggcgcccgccaagaaggctgcttcg
aggtcctga
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