Mycobacterium avium subsp. paratuberculosis E93: RE97_18050
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Entry
RE97_18050 CDS
T03847
Name
(GenBank) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RE97_18050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mavu03019
]
RE97_18050
03012 Translation factors [BR:
mavu03012
]
RE97_18050
Messenger RNA biogenesis [BR:
mavu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
RE97_18050
Translation factors [BR:
mavu03012
]
Eukaryotic type
Release factors
RE97_18050
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
baeRF_family2
baeRF_family10
eRF1_3
Host_attach
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
AJK80893
LinkDB
All DBs
Position
3903198..3904316
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AA seq
372 aa
AA seq
DB search
MDSQRFRKLLDAPGPFVSVYFDDSHDTHDAEAQLELKWRAIREDLERRGVGVPIVAGIED
AVMNLRPPIGRSGRAVIAGADGVLINEHLARPAATTILRVSELPYLVPVLEQSFDHPDYV
LVVVDHSGADITTHIGGTLRSETVDGTGYPVHKAAGAETAGYGDPQLRTEEAARKNVRAV
ADRVAELADDKAIDVIFVVGEVRSRSDLLAALPERLHDRAVTLEVGARHSGHDFTEIERA
IEAEFVKRQLRAIDDAAQRFTAEIGRQSGLAAQGLDAVCSALRQGAVETLIIGDIGDATV
VADEGLTTVAPNENVLSEQGAAPARTLRADEALPFSAIKVGANLVRTDERIAPADGVGAV
LRYAPTLHQSVE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcaacgcttccgcaaactgctggacgcaccggggccgttcgtttcggtgtat
ttcgacgactcgcacgacacccacgacgccgaggctcaactcgagctcaagtggcgcgcg
atcagagaagacctggaacgccgcggcgtcggcgtgccgatcgtcgccggcatcgaggac
gcggtgatgaacctgcgcccgccgatcgggcgcagcgggcgggcggtgatcgcgggcgcc
gacggcgtgctgatcaacgagcaccttgcccgcccggcggccaccaccatattgcgggtg
tccgaattgccttatctggtaccggttttggagcagagcttcgaccaccccgactatgtg
ctggtggtggtggaccacagcggcgccgacatcaccacccacatcggcggcacgctgcgc
agcgagaccgtcgacggcaccggctacccggtgcacaaggcggccggggccgagaccgcc
ggatacggcgacccgcagttgcgcaccgaggaggccgcccgcaagaacgtccgcgccgtc
gccgaccgtgtcgccgaactggccgacgacaaggcgatcgacgtgatcttcgtggtcggc
gaggtgcgttcgcgctcggacctgctggccgcgctgccggaacggctgcacgaccgcgcc
gtgacactcgaggtcggggcgcggcacagcggccacgacttcacggagatcgagcgggcc
atcgaggccgagttcgtcaaacgtcagctgcgcgccatcgacgatgccgcacagcggttt
accgccgagatcgggcggcaatcggggctggcggcccaggggctcgacgcagtttgctcg
gcgctgcgccagggcgcggtggaaacgctgatcatcggtgacatcggcgacgccaccgtg
gtcgccgacgagggcctgaccaccgtcgcccccaacgagaacgtgctgtccgagcagggc
gccgccccggccaggacgctgcgcgccgacgaggcgctgccgttctcggcgatcaaggtg
ggcgccaacctggtgcgcaccgacgagcggatcgccccggccgacggggtgggcgcggtg
ctgcgctacgcaccgacgctgcaccaaagcgtcgagtga
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