Mycobacterium avium subsp. paratuberculosis E93: RE97_20180
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Entry
RE97_20180 CDS
T03847
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03018
RNA degradation
mavu05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE97_20180 (groEL)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
RE97_20180 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mavu03019
]
RE97_20180 (groEL)
03110 Chaperones and folding catalysts [BR:
mavu03110
]
RE97_20180 (groEL)
03029 Mitochondrial biogenesis [BR:
mavu03029
]
RE97_20180 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mavu04147
]
RE97_20180 (groEL)
Enzymes [BR:
mavu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RE97_20180 (groEL)
Messenger RNA biogenesis [BR:
mavu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RE97_20180 (groEL)
Chaperones and folding catalysts [BR:
mavu03110
]
Heat shock proteins
HSP60 / Chaperonin
RE97_20180 (groEL)
Mitochondrial biogenesis [BR:
mavu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RE97_20180 (groEL)
Exosome [BR:
mavu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RE97_20180 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RE97_20180 (groEL)
Exosomal proteins of breast cancer cells
RE97_20180 (groEL)
Exosomal proteins of colorectal cancer cells
RE97_20180 (groEL)
Exosomal proteins of bladder cancer cells
RE97_20180 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
AJK81267
LinkDB
All DBs
Position
4354517..4356142
Genome browser
AA seq
541 aa
AA seq
DB search
MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEKVTETLLKSAKEVETKDQIAATAAISAGDQSIGDLIAEAMDKVGNEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPFILLVSSKVSTVKDLLPLLEKVIQ
AGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
EEVGLSLESADISLLGKARKVVVTKDETTIVEGAGDSDAIAGRVAQIRTEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLHA
IPALDELKLEGEEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPAGTGLNAATG
EYEDLLKAGIADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaattgcgtacgacgaagaggcccgtcgcggcctcgagcgggggctcaac
gccctcgccgacgcggtaaaggtcacgttgggccccaagggtcgcaacgtcgtcctggag
aagaagtggggtgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctggaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgccggtgacggcacgacgacggccacggtgctcgcccaggcgttggtccgc
gagggcctgcgcaacgtcgcggccggcgccaacccgctgggtctcaagcgcggcatcgag
aaggccgtcgagaaggtcaccgagaccctgctcaagtcggccaaggaggtcgagaccaag
gaccagatcgctgccaccgcggccatctccgcgggcgaccagtcgatcggcgacctgatc
gccgaggcgatggacaaggtcggcaacgagggcgtcatcaccgtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggtatgcggttcgacaagggttacatctcgggc
tacttcgtcacggacgccgagcgtcaggaagcggtcctcgaggacccgttcatcctgctg
gtcagctccaaggtctcgaccgtcaaggacctgctgccgctgctggagaaggtcatccag
gccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtccaccctg
gtcgtcaacaagatccgcggcaccttcaagtcggtggccgtcaaggcgcccggcttcggc
gaccgccgcaaggcgatgcttcaggacatggccatcctcaccggcggccaggtcatcagc
gaagaggtcggcctgtcgctggagagcgccgacatctcgctgctcggtaaggcccgcaag
gtcgtcgtcaccaaggacgagaccaccatcgtcgagggcgccggtgactccgacgccatc
gccggccgggtggcccagatccgcaccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcggctggccaagctggccggcggcgtggcggtgatcaaggccggc
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtccgcaac
gccaaggcggccgtggaggagggcatcgtcgccggcggtggcgtggccctgctgcacgcg
atcccggctctggacgagctgaagctcgagggcgaagaggcgaccggcgccaacatcgtc
cgggtggccctcgaggctccgctgaagcagatcgccttcaacggtggcctggagcccggc
gtggtggccgagaaggtccgcaactcgcccgccggtaccggcctcaacgccgccaccggt
gagtacgaggacctgctcaaggccggcattgccgacccggtgaaggtcacccgctcggcg
ctgcagaacgcggcgtccatcgcggggctgttcctgaccaccgaggcggtcgtcgccgac
aagccggagaaggcggccgctcccgcgggcgacccgaccggcggcatgggcggcatggac
ttctga
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