Mycobacterium avium subsp. paratuberculosis E93: RE97_20980
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Entry
RE97_20980 CDS
T03847
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RE97_20980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_20980
Enzymes [BR:
mavu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RE97_20980
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RE97_20980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
PhoH
AAA_16
SH3_13
AAA_28
nSTAND3
TrwB_AAD_bind
Mg_chelatase
AAA_29
T2SSE
AAA_5
SRP54
ATPase
NTPase_1
Herpes_Helicase
DO-GTPase1
MukB
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AJK81405
UniProt:
A0A7L5MQG6
LinkDB
All DBs
Position
complement(4519559..4521283)
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AA seq
574 aa
AA seq
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MTADVLPERVFDAGPLRPFADAGIFEAADVRVAQRLTALTGESDDRVALAVALLVRALRG
GSVCVDLRAVPAQVGAADLPWPAAGDWLAAVRASPLLGPPPVLRFFGDLLYFDRYWLEEE
QVCTDLLALSAPAGDVESSCYERLFPPGYEEQRAAARIAVSQALTVLTGGPGTGKTTTVA
RLLALLVEQAERAGEPRPRIALAAPTGKAAARLAEAVAAEIEHLDPADRARLAGLTGTTL
HRLLGPRPDTSVRFKHNRGNRLPHDIIVVDETSMVSLTMMARLAEAVRPDTRLILVGDPD
QLASVEAGAVLADLVDGLAGRAGVRVAALATPHRFGSAIGALAAAIRAGDADRVLELLAA
GGEHIEWVDSERPADRLREVLVSHALRLRSAALLGAAQAALATLDEHRLLCAHRDGPHGA
VRWNTLVHNWIAEETGQPAWSQWYAGRPLLVTANDYGLRLYNGDTGVTVAGADGLRAVIA
GAAGPLDFATSRLGEVETMHAMTIHKSQGSQADEVTVLIPPEDSRLLTRELFYTAVTRAK
SRVRVVGPEASVRAAIERRAIRATGLRQRLRAVG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggacgtgttgccggagcgggtgtttgacgccgggccgctgcgcccgttcgcc
gacgccggcatcttcgaagcagcggatgtccgtgtggcgcaacggcttaccgcgctcacc
ggcgagtccgatgatcgggtggcgctggccgtcgccctgctggtgcgcgcgctgcggggc
ggttcggtgtgcgtcgatctgcgggcggtgccggcacaggtcggcgcggcggacctgccc
tggcccgccgccggcgactggctggccgcggtgcgggccagcccgctgctcgggccgccg
ccggtgctgcggttcttcggcgatctgctctacttcgaccggtactggctggaggaagag
caggtgtgcaccgatctgctggcactgtcggcaccggcgggcgatgtcgaatcctcatgc
tacgaaaggcttttcccgcccggctacgaagaacagcgggcggccgcccggatcgcggtg
tcccaggcgctcaccgtgctgaccggcgggccgggcaccggcaagaccaccacggtcgcg
cggctgctcgccctgctggtcgagcaggccgagcgcgccggtgagccgcggccgaggatc
gcgctggccgccccgaccggcaaggcggccgcgcggctggccgaggcggtggccgccgag
atcgagcacctcgacccggccgaccgggcgcggctggccgggctgaccggcaccacgctg
caccggctgctggggccgcgccccgatacgtcggtgcggttcaagcacaaccgcggcaac
cggctgccgcacgacatcatcgtggtcgacgagacgtcgatggtgtcgttgaccatgatg
gcccggctggccgaagccgtccggccggacacccggctgatcctggtcggcgatcccgac
cagttggcctcggtggaggcgggcgccgtgctggccgatctggtcgacgggctggccggc
cgcgccggggtgcgggtcgccgcgctggccaccccgcaccggttcggcagcgcgatcggc
gcgctggccgcggcgatccgggccggcgacgccgaccgggtgctggagttgttggcggcc
ggcggtgagcacatcgagtgggtggattccgagcgcccggccgaccggctgcgcgaggtg
ctggtgtcgcatgcgctgcggttgcgctcggcggcgctgctgggcgcggctcaggccgcg
ctggccacgctggacgagcaccggctgctgtgtgcgcaccgcgacgggccgcacggggcg
gtgcggtggaacacgttggtgcacaactggattgccgaagaaaccggtcagccggcctgg
tcgcaatggtatgccgggcgtccgctgctggtgacggcgaacgactacgggctgcgtctg
tacaacggcgacaccggcgtgacggtggccggtgcggacgggctgcgggccgtcatcgcc
ggtgcggccggcccgctggacttcgccaccagccggctgggcgaggtggagacgatgcac
gccatgaccatccacaagagtcagggcagccaggccgacgaggtgacggtgctgataccg
ccggaggattcgcggctgctgacccgggaactgttctacaccgcggtgacccgggccaag
agcagggtgcgggtggtggggcccgaggcgtcggtgcgggccgcgatcgagcgccgggcg
atccgggccaccggactgcggcagcggctgcgggcggtcgggtga
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