Mycobacterium avium subsp. paratuberculosis E93: RE97_20990
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Entry
RE97_20990 CDS
T03847
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Pathway
mavu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RE97_20990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mavu03400
]
RE97_20990
Enzymes [BR:
mavu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RE97_20990
DNA repair and recombination proteins [BR:
mavu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RE97_20990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJK81406
LinkDB
All DBs
Position
complement(4524582..4527872)
Genome browser
AA seq
1096 aa
AA seq
DB search
MPLHLHRAERTDLLADGLGALLANPPADPFALELVVVPARGVERWLSQRLSHVLGRARDG
DGVCAGVQFRSPGSLIAEITGTADDDPWSPDALAWPLLEAIDCSLDEPWCRTLATHLGHF
DTGAEAELRRTRRYEAARRLAGLFAGYARQRPRLLVDWLDGDPGDLDEDLRWQPPLWRAL
LARVAADPPHVRHAETIARLRRAPSDLPQRLSLFGHTRLACTDVELLDALATHHDLHLWL
PHPSDRLWRALAGTHGVIPRRDDTSHRAVAHPLLATLGRDLRELQRGLPADPRTDEYLAG
DARPDTLLGWLQSDIAANAVRPVGRSLAAGDRSVQIHNCHGPARQVDVLREMLLGLLADD
PTLQPRDILVMCPDIESYAPLIMADFGLGDVVHGAHPAHQLRVRLADRSLIQTNPLLGVA
AQLLALAGGRVRASEVLNLAQTPAVRARFGFTDDDLDTITGWVRQANIRWGLDRQHRRPY
HVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVQLAGQLAEFVARLQHV
LDSLTGARPLTDWLTAVADGIALLTRVRDADEWQSGQLQREFAAVSAQAGSRADTVLRLP
DVRALLTRHLSGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLGVVDGDD
ALARCPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLAELLDTL
DITTAEPVRDRIVVRHPLQPFDIRNIIPGELVPGVPFSFDPTVLRAAHAATGEHCEPPKF
ISAPLPPPPPADVILADLVGFFKDPVQGFFRALQFTLPHDVDGVQDAMPVDIDALQEWTV
GDRMLRDMLRGMTPEDARQAEWRRGTLPPGQLGWRRVTEIRDQAARLALEAHQHRAEQPG
GAHDVDIDLGRGRRLTGTVTPVYGDRLVAVTYSRLDGRHLLESWIPLLALAAHDRGRDWS
AVCIGRMRRGTGIRVQRLGSPDDDPVELLRELVSIYDAGRREPIPLPLKTSYAWAAARYG
GDDPVAEARYRWKSSDRYPGEDQAPAHVRAWGRGAPLDDLMRPVRPGEECDGEDNRLGAY
AARLWLPMLRAERTTA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcacctgcaccgtgccgagcgcaccgatctgctggccgacggtctcggcgcg
ctgttggccaatccaccggccgacccgttcgccctcgagctcgtcgtggtgcccgcgcgt
ggggtggagcgctggctgagtcaacggctgtcgcatgtgctgggccgcgcccgcgacggg
gacggggtctgcgccggcgtgcaattccgcagtcccggctcgctgatcgccgagatcacc
ggcacggccgacgacgatccctggtcgccggacgccctggcctggccgctgctggaggcg
atcgactgttcgctggacgagccgtggtgccgcacgctggcgacgcacctgggccacttc
gacaccggcgccgaggccgagctgcgccgcacccgccgctacgaggcggcgcgccggctg
gccgggctgttcgccggctacgcccggcaacggccgcggctgctggtcgactggctcgac
ggcgacccgggcgatctggacgaggacctgcgctggcaaccgccgctgtggcgggcgctg
ttggcccgggtggccgccgatccaccgcacgttcggcacgccgaaaccatcgcccggctg
cggcgggcgcccagcgacctgccgcagcggctgtcgctgttcgggcacacccggttggcg
tgcaccgacgtggagctcctggacgcgctggccactcaccacgacttgcacctgtggctg
ccgcacccgagcgaccggttgtggcgcgcgctggccggcacgcacggcgtgatcccccgg
cgcgacgacaccagccaccgcgccgtcgcccacccgctgctggccacgctgggacgggat
ctgcgcgaactgcagcgcggcctgccggcggatccgcggaccgacgagtacctggccggc
gacgcccgccccgacacgctgctgggctggctgcagtccgacatcgccgccaatgccgtt
cgcccggttggccgctcgctggccgccggggaccgctcggtgcagatccacaactgccac
gggccggcccgccaggtcgacgtgctgcgcgagatgctgctgggcctgctcgccgacgac
ccgacgctgcagccgcgcgacatcctggtgatgtgccccgacatcgaaagctacgcgccg
ctgatcatggccgacttcggcctcggcgacgtggtgcacggcgcgcaccccgcccaccag
ctgcgggtgcggctggcggaccgttccctgatccagaccaacccgctgctcggggtggcc
gcgcagctgctggccctagccggcggccgggtgcgggccagcgaggtgctcaacctggcc
cagacgccggcggtgcgcgcccggttcggcttcaccgacgacgatctggacaccatcacc
ggatgggtccgccaggccaacatccgctgggggctggaccggcagcatcggcggccctac
cacgtcgacttcgtgcacaacacctggcgtttcggcatcgaccggatactggccggcgtc
gcgatgtccgacgactcgaacgcgtggatcgacgcgacgctgccgctcgacgacgtcagc
agcaatcgtgtccaattggccggccagctcgcggaattcgtcgcccggctgcagcacgtc
ctggactcgctcaccggtgcccggccgctgaccgactggctcaccgccgtcgccgacggc
atcgccctgctgacccgggtgcgcgatgccgacgaatggcagagcggtcagctgcagcgc
gagttcgccgcggtgtccgcgcaggccggatcccgcgccgacaccgtgctgcggctgccc
gacgtccgcgcgctgctgacccggcacctgtccggacgtccgacccgcgcgaatttccgc
accggcacgctgacggtgtgcaccatggtgccgatgcgttcggtaccgcaccgggtggtg
tgcctggtcggcctggacgacgggctgttcccgcggctcggtgtcgtcgacggtgacgac
gcactggcgcgctgcccgatgaccggggagcgcgacatccgttccgaggaccggcaattg
ctgctcgacgcgatcggcgcggccaccgagaagctggtgatcacctacaccggcgccaac
gagtattcgggtcagccacgcccgccggcggtgccgctggccgaactgctggacaccctc
gacataaccaccgccgagccggtgcgcgaccgcatcgtcgtgcgacatccgttgcagccg
ttcgacattcgcaacatcatccccggcgagctggtgcccggggtgccgttcagtttcgac
cccacggtgctgcgcgcggcgcacgcggccaccggcgaacactgcgagccaccgaagttc
atctccgcgccgctgccgcccccgccgcccgctgacgtgatcctggccgatttggtcggc
ttcttcaaagacccggtgcaggggttctttcgggccctgcagttcacgctgccccacgac
gtcgacggagtgcaggacgcgatgccggtggacatcgacgccctacaggagtggacggtc
ggcgatcgcatgctgcgcgacatgctgcgcgggatgaccccggaggacgctcggcaggcc
gagtggcgccgcggcaccctgccgccggggcagctgggctggcgcagggtgaccgagatc
cgcgaccaggcagcgcgattggcattggaggcgcaccagcaccgggccgagcagccgggc
ggcgcccacgacgtcgacatcgatctgggccgcgggcgccggctcaccggcacggtgacc
ccggtctacggcgaccgcctggtcgcggtgacctattcgcggctggacggcaggcatctg
ctcgagtcgtggattccgttgctggcgttggccgctcacgatcgcggccgcgactggtcg
gcggtgtgcatcgggcggatgcgccggggcaccggcatccgggtgcagcggctcgggtcg
ccggacgacgatcccgtcgagctgctgcgcgagctggtgagcatttacgacgccgggcgg
cgcgagccgattccgttgccgctcaagacctcctacgcgtgggcggccgcccgctacggc
ggcgacgacccggtggccgaggcgcgctaccggtggaagtccagcgaccgctaccccggg
gaggaccaggcgccggcgcatgtgcgggcctggggacgcggtgcgccgctggacgacctg
atgcggccggtgcgcccgggcgaggagtgcgacggcgaggacaaccggctcggcgcctac
gcggcccggctgtggctgccgatgttgcgggccgagcggacgacggcgtga
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integrated database retrieval system
