Metarhizium acridum: 19245216
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Entry
19245216 CDS
T03104
Symbol
SUB2, J3458_009325
Name
(RefSeq) Suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
maw
Metarhizium acridum
Pathway
maw03013
Nucleocytoplasmic transport
maw03015
mRNA surveillance pathway
maw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
19245216 (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
19245216 (SUB2)
03015 mRNA surveillance pathway
19245216 (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maw03019
]
19245216 (SUB2)
03041 Spliceosome [BR:
maw03041
]
19245216 (SUB2)
Enzymes [BR:
maw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
19245216 (SUB2)
Messenger RNA biogenesis [BR:
maw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
19245216 (SUB2)
Spliceosome [BR:
maw03041
]
Complex C
Other components
EJC/TREX
19245216 (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
19245216 (SUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
ResIII
DUF4844
DUF6066
Motif
Other DBs
NCBI-GeneID:
19245216
NCBI-ProteinID:
XP_065975508
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MCHTRELAYQIRDEYNRFSKYMPDIKTGVFFGGTPIKTDMETLKNKDTCPHIIVGTPGRL
KALVRDKALRLGSVRIFVLDECDKMLDQPDMRTDVQDVFRATPTQKQVMMFSATLANEIK
PICRKFMQNPTEHYVDEDTKLTLHGLQQYYIKLEEKEKNRKLNELLDELQFNQVIIFVKS
TIRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFKKRICVATDVFGRGIDIERI
NLAINYDLPADASSYLHRVGRAGRFGTKGLAISFVSSDQDQEVLKEIEKRFEVALPEFPK
EGVDASTYMAS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacacccgtgaacttgcctaccagattcgcgacgagtacaaccgattcagcaag
tacatgcctgacatcaagactggtgtattctttggtggcactcccatcaagaccgacatg
gagaccttgaagaacaaggacacctgcccccacattatcgttggtactccaggtcgtctc
aaggctcttgtccgcgacaaggctctacgcctcggcagtgttcgcatctttgtccttgat
gaatgcgacaagatgcttgatcagcctgatatgcgcactgatgtccaggatgtcttccgc
gccacccctacccagaagcaggtcatgatgttctctgctactttggctaatgagatcaag
cccatttgcaggaagttcatgcagaaccccactgagcactatgtcgatgaggacaccaag
ctcactctgcacggtcttcagcagtactacatcaagctcgaagagaaggaaaagaacaga
aagctgaacgagcttctcgacgaactccaattcaaccaggtcatcatctttgtcaagagc
accattcgtgccaccgaacttgacaagttgctgcgcgaatgtaacttcccttcgattgct
gtgcactctggtgtgagccaggaggagcgtatcaaacgttacaaggagttcaaggagttc
aagaagagaatttgcgttgccactgacgtttttggtcgtggtattgacattgaacgtatc
aacctggccatcaactacgatctccctgccgatgctagttcatacctccaccgtgtcggt
cgtgccggccgtttcggtaccaagggtcttgccatctcgtttgtcagttcagaccaggac
caggaggtgctcaaggagatcgagaagcggttcgaagttgccctacctgaatttcccaag
gagggtgtcgatgccagcacgtatatggcttcgtaa
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