Metarhizium acridum: 19252261
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Entry
19252261 CDS
T03104
Symbol
lsm7_2, J3458_021175
Name
(RefSeq) U6 snRNP-associated protein Lsm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
maw
Metarhizium acridum
Pathway
maw03018
RNA degradation
maw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
19252261 (lsm7_2)
09123 Folding, sorting and degradation
03018 RNA degradation
19252261 (lsm7_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maw03019
]
19252261 (lsm7_2)
03041 Spliceosome [BR:
maw03041
]
19252261 (lsm7_2)
Messenger RNA biogenesis [BR:
maw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
19252261 (lsm7_2)
mRNA degradation factors
5'-3' decay
Lsm complex
19252261 (lsm7_2)
Spliceosome [BR:
maw03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
19252261 (lsm7_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
19252261
NCBI-ProteinID:
XP_007814290
UniProt:
E9EDK2
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
MSDRPTHRGGRGGGGGGGGPRGGRGGGRGGRDGGRDGGDKGEKPKKENILDLAKYMDKEI
TVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPLGLVVARGTLLVVITPV
DGSEEIANPFATAEE
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagacccacgcaccgaggcggaagaggaggaggaggaggagggggaggtcct
cgcggcggacgaggtggtggtcgtggtggtcgtgatggtggtcgcgacggcggcgacaag
ggcgagaagcccaagaaggagaatatcctcgacttggcaaagtacatggacaaggagatt
accgtcaaattcaacggcggacgagaggtcacgggcacgctaaagggttacgatgcgctc
atgaatttggtgttggacgaggttagggaaacggttcgagatgaagaaggaaacgagtcc
actcgacctttgggcctcgttgttgctcgcggtactcttctcgtggtcattactcccgtc
gatggcagcgaagaaatcgccaatccctttgcaacggcggaggagtag
DBGET
integrated database retrieval system