Metarhizium acridum: 19252593
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Entry
19252593 CDS
T03104
Symbol
rcd1_1, J3458_000408
Name
(RefSeq) RNA-binding protein, CCR4-NOT complex subunit Rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
maw
Metarhizium acridum
Pathway
maw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
19252593 (rcd1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maw03019
]
19252593 (rcd1_1)
Messenger RNA biogenesis [BR:
maw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
19252593 (rcd1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TFIIA
Maf1
Rotamase_3
DUF702
VPS13_N
eIF-3_zeta
UPF0524
PAT1
FAM171A1-2-B_C
Motif
Other DBs
NCBI-GeneID:
19252593
NCBI-ProteinID:
XP_065978003
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MMSSTHVYTHPQYNPQGDSSWMHQQASHHQQSHVSVAQQQQQQQQQQQQQQQQQQQQQQQ
AQQQQSHFNRMAGNHSAGGAGGNMGGAHAQDSGHENISEDNRRTMAYIADLLNENTREAA
LLELSKKREQVPELALILWHSFGVMTSLLQEIISVYTLLNPSQLTAIASNRVCNALALLQ
CVASHNDTRTLFLNAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFL
LTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDNGLNYICATYERFYAVGTVLSNMVA
QLVESQTQRLLKHVVRCFLRLSDNARAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQ
LLINLSDNVVDNSQGVSNM
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcgacgcacgtttatacgcacccccaatacaacccacaaggcgactccagc
tggatgcaccagcaggcttcgcaccaccagcagagccatgtgtctgttgctcaacaacaa
caacaacaacaacaacagcagcagcagcagcaacagcagcaacagcagcaacaacaacag
gctcagcaacaacaatcgcatttcaaccgcatggctggtaatcattctgctggcggcgct
ggtggcaatatgggaggtgctcatgcccaggattccggccacgagaacatctcggaagat
aatcggcgcacgatggcgtacatcgccgatttattaaacgagaacacgagggaggcagct
ttactagagctgagcaagaagagagaacaggtgcctgaactagctctcattttgtggcac
tcattcggagttatgacctctcttttacaggaaataatttccgtctacaccctgctcaac
ccttcgcagctcacagctattgcgtcaaaccgtgtttgcaatgctctggcgctactccag
tgtgttgcgtcgcataatgatacccggaccttgtttcttaacgcacatatccctctgttc
ttgtacccatttctaaatacgacgtccaagtcccgaccgtttgaatatctgcgactaact
tccctgggtgttatcggtgccttggtgaagaacgactcttcggacgttatcaattttctc
ctcactacggagattattcctctgtgccttaggatcatggagactggctcagagcttagt
aagactgttgccatttttattgttcagaagattctgctggacgataacggcctcaattat
atctgcgccacctatgagcgcttctatgctgtaggcactgtgctgagcaacatggtcgct
cagcttgtcgagtcccagactcagcggctcctcaagcacgtcgttcgatgcttccttaga
ctgagcgacaacgcccgagctcgtgaagctcttcgccaatgcctaccagaacccctgcga
gatgctaccttctcgtctgttttaagagacgacgctgcgacgaagagatgccttgctcag
ctccttatcaatttgtctgataacgtcgtggacaactcgcaaggcgtttccaacatgtga
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