Metarhizium acridum: 19253607
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Entry
19253607 CDS
T03104
Symbol
SYF1_1, J3458_005297
Name
(RefSeq) pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
maw
Metarhizium acridum
Pathway
maw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
19253607 (SYF1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maw03019
]
19253607 (SYF1_1)
03041 Spliceosome [BR:
maw03041
]
19253607 (SYF1_1)
Messenger RNA biogenesis [BR:
maw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
19253607 (SYF1_1)
Spliceosome [BR:
maw03041
]
Complex B
Other components
Prp19-related factors
19253607 (SYF1_1)
Complex C
19253607 (SYF1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_8
MIT
AbiH
Motif
Other DBs
NCBI-GeneID:
19253607
NCBI-ProteinID:
XP_007815636
UniProt:
E9EHE8
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MAVSAEMESTSRLPIVSNEDFIYEQDVAGDPASIKPWLVYIDFKSRHGTLSQQNFVMARA
CAQLPRSYKLWKMYLAFRTEHVSKLNPAIFASEYNKVNALFEKALILLNKMPRIWEMYLQ
FLIKQPAITLVRRTFDRALRALPITQHNRIWALYVPFSNAASGDTAVKVWRRYIQVHPEE
AEDFIELLIESGSYTEAAISYVNLLNNVRFASKTGKGHYELWSEMVDLLVDHASEIEVNY
ESGIDVESIIRSGITRFPDQRGKLWVGLATYWIRKGSFERARDAFEQGITTVMTVRDFAL
IFESYTEFEESIIKALMESAANRTDMGVEDEDADFELDVRMMRFEHLMDRRPFLVNDVLL
RQNPNLVSEWEKRVALWGDNKQEVVRTYADAIASIHPKRAVGSFYKLWASYARFYEQGGD
LRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNEKFDEAVRIMSKAVQAPKRSTVDY
FDEALSAQQRVHKSWKLWSFYVDLVESVSTLSEVKRVYERIFELRIATPQTVVNYATLLE
EHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRRIGIERLRDLFEQAVEDCPPKF
AKTIYLMYGNLEEERGLARHAMRIYERATRAVGDEDRADMFNFYITKSASNFGLSSTRPI
YERAISALPDTEAKEMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNADFWARWEQFE
VQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRDSDHRDQHTGATAEPVRQSS
AMHGFVAASSGTPAGATNQQDSPANPDAIDIDGIDD
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcggctgagatggagtccacatctcgtctcccaattgtatcaaacgaggat
tttatatacgagcaagacgtggcaggtgacccagctagcatcaaaccttggctggtctac
attgattttaaatctcgtcatgggacactttcacaacagaactttgtcatggctcgtgca
tgcgcccagttgccgcgatcatacaagctctggaaaatgtatctcgccttccgtaccgag
catgtgtcaaaattgaaccccgctatcttcgcatccgaatacaataaagtcaacgcgtta
tttgaaaaggcacttatacttctcaataaaatgcctcgaatatgggagatgtatcttcag
tttcttatcaaacaaccagcaatcactctcgtaagacgaactttcgaccgcgcgttgagg
gcgctaccaatcacgcaacataatcgaatatgggccttgtatgtaccattctcaaatgct
gcgtcgggtgacactgcagtcaaagtttggcggcgatatattcaggtgcatcctgaagag
gcggaagatttcatcgaacttctaatcgaatcgggttcgtataccgaagctgcaataagc
tatgtcaacctcctcaacaacgtccgattcgcgagcaagactgggaaaggccactacgaa
ctttggagtgaaatggtggatcttcttgtagatcatgcctctgagattgaagtgaattat
gaatcgggtatcgacgttgaaagtatcatcagaagcggaatcactcggtttcccgatcag
agaggcaagctttgggtgggtctagccacctactggatccggaaaggcagcttcgagcga
gcacgagatgctttcgaacagggcataacaaccgtcatgacagtccgcgactttgcgtta
atattcgaatcatacaccgagttcgaagagtccatcattaaagcgcttatggaaagcgca
gcgaatcggaccgacatgggagtggaagatgaagatgcagacttcgaattggatgtgcga
atgatgcggttcgagcatctaatggaccgacggccatttttagtgaacgatgtgctactt
cgccagaatccaaatcttgtctcagagtgggagaaacgagtggctttatggggggacaat
aaacaagaagttgtgcgcacatatgcggatgctattgcttctatccaccccaaacgagcc
gttggctcgttttataaactttgggcgagctatgcacgcttctatgaacaagggggggat
ttaagaaacgcccgcataatcatggagaaagcggtcaaggttccctttaaatccgttgca
gagttggctgacatgtggattgaatgggcagaaatggaacttcggaatgagaagtttgat
gaagccgttcgaatcatgtcaaaagctgtccaagcccccaagcgatccacagtcgactac
tttgacgaggcactctcagcgcaacaaagagtccataagagttggaaactttggagtttc
tacgtggatctcgtagaaagtgtctcgactttgagcgaagtaaaacgagtctatgaacgc
atttttgaacttcgaatcgcaacaccacaaacggtcgtcaactacgcaactcttttagag
gagcacaagtattacgaggagtcattcaagatttatgagcggggcttagacttattcagc
tacccagtcgccttcgagctctggaatctgtacctgacgaaagccgtagatcggaggata
ggtatcgagcggcttcgagatctcttcgagcaagctgtcgaagactgcccccctaagttt
gccaagaccatttacttgatgtatggaaacttggaagaggagcggggtcttgcacgacat
gccatgcggatatatgagagagccacgagggcagtcggggatgaagaccgtgcggatatg
ttcaatttctacattaccaaatctgcttccaattttggtttatcatctactcggcccatc
tatgaaagggccatttccgcattgccagataccgaagctaaggagatgtgcctaaagttt
gcggatatggagaagcgattgggcgagattgacagagcgcgtgcaatttatggacatgcg
tcacaattctgcgacccccgaacaaatgccgacttttgggcgaggtgggaacaatttgag
gtccaacacgggaacgaagatacattcaaggagatgctccgcatcaagagaagcgtccaa
gctcagtacaataccgatgtcaacttcattgcatcacaggccctcgctcggagtcaacgg
gattcagatcatcgtgatcaacacactggtgctacggccgaacctgtcaggcaatcttcg
gcaatgcatggctttgtggcagcgagtagcgggactccagcgggggcaactaatcaacaa
gattcacctgcaaatccagatgcgattgatatagacggcatcgatgattga
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