Metarhizium acridum: 19253610
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Entry
19253610 CDS
T03104
Symbol
RAT1_1, J3458_005293
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
maw
Metarhizium acridum
Pathway
maw03008
Ribosome biogenesis in eukaryotes
maw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
19253610 (RAT1_1)
09123 Folding, sorting and degradation
03018 RNA degradation
19253610 (RAT1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maw03021
]
19253610 (RAT1_1)
03019 Messenger RNA biogenesis [BR:
maw03019
]
19253610 (RAT1_1)
03009 Ribosome biogenesis [BR:
maw03009
]
19253610 (RAT1_1)
03016 Transfer RNA biogenesis [BR:
maw03016
]
19253610 (RAT1_1)
Transcription machinery [BR:
maw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
19253610 (RAT1_1)
Messenger RNA biogenesis [BR:
maw03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
19253610 (RAT1_1)
Ribosome biogenesis [BR:
maw03009
]
Eukaryotic type
Pre-60S particles
RNases
19253610 (RAT1_1)
Transfer RNA biogenesis [BR:
maw03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
19253610 (RAT1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC_3
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
19253610
NCBI-ProteinID:
XP_007815639
UniProt:
E9EHF1
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSTVPVDTTSRNPNGEEFDNLYLDMNGIV
HPCAHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF
RSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTPFMDILAVSL
RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA
DLIMLGLATHEPHFRVLREDVFFQEGKARICQLCGQKGHEARNCRGEAKEKAGDIDDKPG
NATLKPFIWLHVSVLREYLAAELAVPALPFRFDLERAIDDWVFMCCFVGNDFLPHLPALE
IREHGIDTLTTIWRNNLPTMGGYVTKDGHIDLERAQRILDGLAKQEDAIFKRRKEQEDRR
EANAKRRKLQHDNNSYRGSRGNLAEDRKYGHHDPSQGLPLYPISSYPKEPPRAITHDMVV
NKSSAQAANVANKSAASIIKDQIRAANRHDPVGAEPETSSSILGKRKAEPQSDTETANTN
AKVGTVQASKPEYPAPAEDPIDTVRLWEDGYADRYYQQKFHRSPDDISFRHKVARAYVEG
LAWVLLYYFQGCPSWEWYYPYHYAPFAADFKDLANMDIAFEKGRVSKPFEQLMSVLPAAS
RHALPEVFHPLMTDEDSEIIDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQNKY
PLLSSAEAARNARGRDVLLLSDNNGSMYDDILTKFYSKRQECSKFKLNPKNSDGLSGKVE
KRDDYVPHGALQYPLARGAMPNLDYDKSVSVYYDMPQTHQTHKSMLLRGANLPPPVLTPS
DVEVIRGKSRRAPGYNNYNYHNGDRRRAPSASSNFTPQAPIWRPPPPGGPGFGMGVPPPP
PAYGIQNHPGNGYYRSGNRGRNNNNVPRW
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcccagctgcttttcgatggctctccaacaaatatcccaagatcatctcaccg
gtgattgaagaccaaccggttgtaatgccggatggttctactgtacctgttgatacgact
agtcgcaatccgaatggcgaggaattcgataatctctaccttgatatgaacggcatcgtt
catccttgtgcacatccggaagacaaacccgcgcctgaggatgaggaggcaatgatgctc
gaggtattcaagtatacagaccgtgtcgtcaacatggttagacctcggaagctcctcatg
attgctgttgatggtgtcgcacctcgcgccaaaatgaaccagcaacgctctcggcggttc
cggtccgcgcaagacgccaaagaaaaggaagagaataaggaggagctgctgaagcttgtg
aaacaacaaaacggcggagttctgccgccggatcacatcgaaagtgtcgccaagaaaatt
ttcgacaacaactccatcacaccgggtacacctttcatggatatattggccgtgagcttg
cggtattggtgccagtataaattaaacactgatccagcatgggctaaaatgaaggtcttg
atttctgatgccactgtcccgggcgaaggcgagcacaaaatcatgtcctttattcggtct
cagagagcatcgccggaatacgaccccaatacccgtcatgttatctatgggctagatgcc
gatctaatcatgctaggcttagcaacacatgagccgcacttccgagttcttcgagaagat
gtattctttcaggaaggaaaggctagaatatgccagctatgcggacaaaaaggacatgaa
gcacggaattgccgaggcgaggcaaaagagaaggcgggcgatatcgatgacaagcctggc
aatgctacgctaaagcccttcatctggctacacgtttcggtgctgcgggagtatctcgca
gctgaattagccgttcctgcattaccatttcgattcgatctagagcgggcgattgatgat
tgggtcttcatgtgttgctttgtcggaaacgattttcttccacatctgccggcattggaa
atccgagagcatggtattgatacattgacaaccatctggagaaataatttgccgaccatg
ggcggttatgtcacaaaagacggacacatagatctagaaagggcacagcggattttggat
ggtcttgcaaagcaagaagacgcgatattcaagcgccggaaagagcaggaagaccgccgt
gaggcaaacgcaaagcgaagaaagctgcagcacgacaataactcatatcgcggaagtcgc
ggaaaccttgctgaagaccgcaagtatggtcaccacgatccatctcagggactgcctctt
tatcctatctcctcatatcctaaggaaccacctcgagctatcacccatgatatggtggtg
aataagagctctgcccaagccgcgaatgttgccaacaaaagcgccgcaagcatcatcaag
gaccaaatacgagcagcgaatcgacatgatcctgtcggggctgagcccgaaacttcttct
tccatcctgggcaagcgtaaagcggaaccacagtcggacacggaaacggccaatacaaac
gctaaagtcggcactgtgcaagctagtaaaccagagtatccagcgccagcggaagacccc
attgacacagtccgcttgtgggaggatgggtacgctgataggtattaccagcaaaagttt
caccgcagtcccgatgatatctcttttcgacacaaggtagcacgggcgtatgttgaggga
ctggcttgggtcctcctatactattttcagggctgcccttcgtgggagtggtactaccca
taccactatgccccgtttgcagcagattttaaggaccttgcgaacatggatatcgccttt
gagaaggggagggtgtccaaaccgttcgagcagctgatgagtgtcttgccagcagcctca
cgccacgccctccctgaagtttttcatcccttgatgacggatgaggacagcgaaataatt
gacttttatcccgaagatttcgaagtagatctgaatgggaaaaagatggcatggcaaggt
gtcgccttgctacctttcattgacatgcccagactgctggccgccgtgcagaacaagtat
ccacttctaagctctgccgaggccgcgaggaatgcaaggggaagagacgtgcttctgttg
tcggacaacaacgggagcatgtatgacgatattttgaccaagttttattctaaacgacaa
gaatgctccaaattcaagctaaatccgaaaaacagtgatggcttatcggggaaggttgag
aagcgggatgattatgtcccacacggcgcgctgcagtatcctctagcgaggggtgccatg
ccaaacttggactacgataagtctgttagcgtctactacgatatgcctcaaacacatcaa
acccataaatcgatgttgttacggggagcaaatcttccacctcctgtgcttacgcctagt
gatgtggaagttattcggggcaaatcaaggcgggctcctgggtacaacaactacaactac
cacaatggtgatagacgaagggctcctagtgcttcttccaattttacgccacaggcccca
atatggcgcccaccgcctcctggtggccctggctttgggatgggagttccgccgccaccg
ccggcatatggtatccaaaaccacccaggaaatggctactatcgatctggaaaccggggg
cggaataataataacgtgcctaggtggtag
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