Methanomethylophilus alvi: MMALV_00300
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Entry
MMALV_00300 CDS
T02624
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
max
Methanomethylophilus alvi
Brite
KEGG Orthology (KO) [BR:
max00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
max03016
]
MMALV_00300
Enzymes [BR:
max01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MMALV_00300
Transfer RNA biogenesis [BR:
max03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MMALV_00300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AGI84787
UniProt:
M9SGR3
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All DBs
Position
24678..25727
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AA seq
349 aa
AA seq
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MPGELEDCSVYIRDVREASQTYSKGNFGYPMSGGFLELDLVEAAFLVQANRLEVFHKKKR
MGFAELFDYASGKVDNFDIKYIVFKDLRERGFIVKPESGSFDLRVYPRGMSPSNSAPLYM
VCAVSERAALDIGEFLNEVSQSEDRGKQLLYGVVDEEGDLTYYKMAMMDPEGKVLPAEGT
AKAVGKLVGDRIFVFDKDQGQALHDEAFYGKDMQGVLQLSLIEGCYLIGKGELEVLNRKG
KGMSDKDLVSFGRKTQDEFDLRLRTYVDLRNRGLVVKTGFKYGTHFRVYEKSPDDCHARY
LVHAVPVSTVAMWPEISRTVRLSGGVKKEILFARVSNEIEYLEFKWFKP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagaactcgaggattgctccgtctacatccgtgacgtcagggaagccagccaa
acctattccaaaggcaacttcggctatcctatgagcggaggcttcctggaactcgatctc
gtggaggcggctttcctcgtgcaggcaaaccgtctcgaggtcttccacaagaagaaacgc
atgggtttcgcagaactcttcgactatgcttccggaaaggtcgacaatttcgacatcaaa
tacatcgtgttcaaggacctgagggaaagagggttcattgtcaagcccgaatcggggagt
ttcgatctccgcgtgtatcctagggggatgtcccccagcaattccgcccctctctacatg
gtatgcgcggtctcggagcgtgccgctctggacataggggagttcctgaacgaggtgtcc
caatccgaggacaggggcaaacagctcctgtacggggtcgtcgacgaggaaggggacctc
acatactacaaaatggccatgatggacccggaggggaaggtcctccctgcggaggggact
gcaaaggccgtcggaaagctggtcggggacaggatattcgttttcgacaaggaccaggga
caggcccttcatgacgaggcgttctacggcaaggatatgcagggggtcctgcagctctcc
ctgatcgagggatgttatctgatcgggaaaggcgaactggaagtcctcaaccgtaaggga
aaggggatgtcggacaaggacctggtctctttcggcagaaagacccaggatgagttcgac
ctccgtctcaggacgtatgtggatctcaggaacaggggtcttgtggtgaagaccggtttc
aagtacggcacccatttcagagtctacgagaagtctcccgacgactgtcatgccaggtat
ctggtacatgccgtccccgtgtcgacggtggccatgtggcccgagatctccaggaccgta
aggctgtccggcggtgtgaagaaggagatcctcttcgcacgcgtaagcaacgagatcgag
tatctcgagttcaagtggttcaagccatga
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