Methanomethylophilus alvi: MMALV_02970
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Entry
MMALV_02970 CDS
T02624
Name
(GenBank) Ribonuclease PH
KO
K12589
exosome complex component RRP42
Organism
max
Methanomethylophilus alvi
Pathway
max03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
max00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMALV_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
max03019
]
MMALV_02970
Messenger RNA biogenesis [BR:
max03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MMALV_02970
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MMALV_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
HET-S
Motif
Other DBs
NCBI-ProteinID:
AGI85048
UniProt:
M9SFP1
LinkDB
All DBs
Position
complement(264013..264807)
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AA seq
264 aa
AA seq
DB search
MISQIKRDHLMNLLADGRREDGRQLDEMRKITVETGIIESAEGSARVHLGNTDVIAGVKV
IPGTPYMDAPGDGVLTTGAELIPLAHESFEPGPPSEDAIELARVVDRGIRESGMIDVKQL
CIKKGEEIWMVFIDIYALDYDGNLFDASNLAAVCALKNAIVPWKQYGKSRTDDDGNVTEM
DNVPMPVTCLPISVTECKIGNDLIVDPNFDEEAISTARLTVTTDNDGNFRAMQKGGKGSI
TRGDLSLCLDRAVEIGKQIRNIIG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgatttcgcagataaagagggaccacctcatgaacctcctcgccgacggcaggagggag
gatggaaggcagctcgacgagatgaggaagatcaccgtcgagaccggcatcatcgaatcc
gccgagggatccgcaagggtccacctcgggaacacggacgtcatagccggtgtcaaggtc
atccccgggaccccttacatggatgcacccggagacggggtactcaccacaggtgcggaa
ctcatcccgctggcacacgagtcgttcgaacccggacccccgagcgaggacgccatcgaa
ctcgcccgtgtcgtggaccgtgggatccgcgagtccgggatgatcgacgtcaagcagctg
tgcataaagaaaggcgaggagatctggatggtgttcatcgacatctatgccctcgactac
gacgggaacctgttcgacgcatcgaacctcgccgcggtatgcgcactcaagaacgccatc
gtcccctggaaacagtatgggaagagcaggaccgatgacgacggcaacgtgacggaaatg
gataatgtacccatgcccgtcacctgtctgcccatatcggtcactgaatgcaaaataggc
aatgatttaatagtagaccctaatttcgacgaggaagcaatctccacggcccgccttacc
gtcaccaccgataacgacgggaacttcagggccatgcagaaaggcggaaagggatcgatc
acccgcggtgacctctcgctctgccttgatagagccgtcgagataggcaaacagattagg
aatatcatcgggtga
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