Methanomethylophilus alvi: MMALV_02990
Help
Entry
MMALV_02990 CDS
T02624
Name
(GenBank) putative exosome complex RNA-binding protein 1
KO
K03679
exosome complex component RRP4
Organism
max
Methanomethylophilus alvi
Pathway
max03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
max00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMALV_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
max03019
]
MMALV_02990
Messenger RNA biogenesis [BR:
max03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MMALV_02990
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MMALV_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
KH_1
KH_6
RRP4_S1
ECR1_N_2
S1
RRP40_S1
KH_KhpA-B
KH_2
KH_KRR1_2nd
KH_N4BP1_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AGI85050
UniProt:
M9SC60
LinkDB
All DBs
Position
complement(265558..266280)
Genome browser
AA seq
240 aa
AA seq
DB search
MEKRNARRTREIVVPGEVLGDSEEYRTGENAYASDGKIRALVMGLKTYTGDAVGVIPMGG
CYMPVTGDTVIGIIADVGPSNWMLDINAPYPAPLHVSEVPWKVEFGDTSRFLTVGDVVLL
KVLMVDEAKKISVTMKDSGLRKIEGGQLVEIAHSKISRVIGKSGSMIQMLKNMTDCRIFV
GQNGRIWIDGDDENVEVAAEAIKIIEAEARSANLTDRVREFIEKKLPQSEEEEDIEEESE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagaaacgccagaaggacacgcgagatcgttgtccccggagaggtgctcggc
gacagcgaagagtacaggaccggagagaacgcatacgcatccgacggcaagatccgcgcc
ctcgttatgggactcaagacctatacgggcgacgcggtaggcgtcatccccatgggcgga
tgctacatgcccgtgacaggagacaccgtaataggaataatcgcagacgttggaccttcc
aactggatgctggacataaatgcaccctaccctgcacccctccatgtgagcgaggtgccg
tggaaggtcgagttcggagatacctccaggttcctgacggtaggggacgtcgtcctcctg
aaggtcctgatggtggacgaggcgaagaagatctccgtcaccatgaaggactccggcctg
aggaagatcgagggcggacagctcgtcgagatcgcacattccaagatctcgagggtcatc
ggcaagagcggatcgatgatccagatgctgaagaacatgaccgactgccgcatattcgtc
ggtcagaacggaaggatatggatcgacggcgacgacgagaacgtcgaggtcgccgcagag
gccataaagataatcgaggcggaggccaggtccgccaacctcacggacagggtcagggag
ttcatagagaagaagctcccccagtccgaggaagaagaggacatcgaggaggaatccgaa
tga
DBGET
integrated database retrieval system
