Methanomethylophilus alvi: MMALV_05070
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Entry
MMALV_05070 CDS
T02624
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
max
Methanomethylophilus alvi
Brite
KEGG Orthology (KO) [BR:
max00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
max03400
]
MMALV_05070
DNA repair and recombination proteins [BR:
max03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMALV_05070
Archaeal homologous recombinant proteins
MMALV_05070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AGI85249
UniProt:
M9SBS6
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All DBs
Position
461403..462650
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AA seq
415 aa
AA seq
DB search
MGGTAVPPFYTSSIVRYNIVPDKYPDFHVPPSTGGFPLKFLHISDLHIGKSLHGFSLLED
QKYILEEILGIAREHGVDAILVAGDVLDSTRAGEDAFGVYNWFMTQASEFPIYVIPGNHD
PAEKLGCCRSLMRDGVHVCGPYCGKAEKHTVEDEYGELNIFLLPYIKTSSVRHFYGDDES
ISTPEAAFAKTMEASEVDPSARNILVCHQFVVGGGIDLRRSDSEACSIFSWGGADCMSYG
VLNDFDYVALGHIHGPQSAGRPEVRYCGSPLKYSESEGPKTATIVEVGEKGHVDIEEVPL
VPLRDLICVRGTTDEILAQSDSFGENYVCATVTGDTENAREKLSSRIPNLMHVDYNVDAG
RLFDSETAISIEEIRSDDMEGLFSKFYMLMMNSELTESQTEILKEACRRVEEGMQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggacggccgtcccgcccttttacacatcttccatcgtccgatataacatcgta
ccggacaaatacccagacttccatgtgcccccgtcaacgggaggctttcctctgaagttc
cttcacatctccgatctgcacataggtaagtcattgcacgggttctcccttctagaggac
cagaagtacatcctggaggagatcctcgggatagcgcgcgagcacggcgtcgatgcgatc
ttggtggcgggcgacgtcctcgactccacccgggcgggagaggatgccttcggggtctac
aactggttcatgacccaggcgtcggaattcccgatctatgtgatcccggggaaccacgac
ccggccgagaagctcggatgctgccgttccctcatgagggacggggtccatgtctgcggt
ccctattgcggaaaggcggagaaacatacggtcgaggacgaatacggggagctgaacatc
ttcctccttccgtacatcaagacgtcttcggtgaggcacttctacggggacgacgaatct
atatcgactcccgaggccgccttcgccaagaccatggaggcctccgaggtggacccgtct
gcgaggaacatcctcgtgtgccaccagttcgtggtcggcggcggtatcgacctgcggcgc
agcgattccgaggcctgctcgatattctcgtggggaggggccgactgcatgtcatacggg
gttctgaatgatttcgactacgtggcgctgggtcatatccatgggccccagtccgcaggg
cgtccggaggtccgttactgcggatccccgctcaaatattccgagtcggaaggtcccaag
acggccaccatagtggaggtcggggagaaggggcatgtggatatcgaggaggtgcccctc
gtccctctgagggacctcatatgtgtcagagggacgacggatgagatactggcacaatca
gattccttcggagaaaactatgtgtgcgcgaccgtcacgggcgataccgagaacgccagg
gagaagctttcctcgaggatccccaatctgatgcatgtagactacaatgtcgatgccggc
agacttttcgacagcgagacggcgatctccatcgaagagatcagatccgacgacatggag
gggctgttctccaaattctatatgctgatgatgaacagcgagctcaccgagtcccagacc
gagatcctgaaagaggcctgcaggagggtggaggaggggatgcaatga
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