Methanomethylophilus alvi: MMALV_06190
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Entry
MMALV_06190 CDS
T02624
Name
(GenBank) Cold-shock DEAD-box protein A
Organism
max
Methanomethylophilus alvi
Pathway
max03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
max00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMALV_06190
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
AAA_30
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGI85360
UniProt:
M9SD68
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Position
581149..582678
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AA seq
509 aa
AA seq
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MTSFEDLGVSPDIVRAAADMGWTEPTPVQMEAVPAGLEGRDLIAKAQTGTGKTGAYSMIT
MTRAKPGSKVPSVLIIAPTRELAMQVDAEIRKLSKRSGHCSVPVYGGADMRRQSDDIRRG
ADIIVGTPGRLRDMCERGILVLDRVSEVVIDEADRMMEMGFEDDLDAVLEHVPKERHTMM
FSATMTRAVERLEKDMLDDPAVVDASDGNAVTGLTKQYVVKCRRDEKKDMLREILSKGTP
KAIVFCATKTMVDDLFQEFRDDAKAGTLHGDMPQSLRERVIRNFRDNRVLVLIATDVAAR
GLDIEDVDLVVNYDAPSRADTYIHRIGRTGRAGREGVSLTLATKRDMDFVRDYEHEIGMR
IRAIDVDDIEPFETVHEPVRRERRPQRGERQASADRVKAPRGKKAGKESARPQRSDDRMV
VEVNVGKNDDVNRTQLADFIRKRAGLGEGDIGKVGLGTASSFVEVPADAADLVIESVGGS
VFGGKTVTCDYAPEKKKFADRYGGKNRTA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttcgaagacctcggggtatcccccgatatagtaagggctgcggccgacatg
ggttggacggagcccacccccgtacagatggaggcggtccccgccggattggaaggacgc
gacctcatagccaaggcgcagaccggtaccggtaagaccggcgcatattccatgatcact
atgaccagggcgaagcccgggtcgaaggtcccgtccgtcctcatcatcgcccccaccagg
gagctcgccatgcaggtggatgcggagatcaggaaactgtccaagcgctccggccactgc
agcgtcccagtgtacggaggggcggacatgcgcaggcagtccgacgacatccgcaggggc
gccgacatcatagtggggacccccggccgcctgagggacatgtgcgagagggggatactg
gtcctcgacagggtcagcgaggtcgtcatcgacgaggcggaccgcatgatggagatgggt
ttcgaggacgacctcgacgccgtgctggaacatgtgcccaaggagaggcacaccatgatg
ttcagcgccaccatgacgcgtgccgtcgagaggctcgagaaggacatgctcgacgacccg
gcggtcgtggacgcctccgacgggaacgccgtcaccggcctcaccaagcagtacgtggtc
aaatgcaggagggacgagaagaaggacatgctgagggagatcctttccaaaggcactccc
aaggccatcgtcttctgtgccaccaagaccatggtggacgacctgttccaggagttcagg
gacgacgcgaaggcggggaccctccacggggacatgccccagtcgctcagggagagggtc
atcaggaacttcagggacaacagggtcctcgttctgatcgccaccgacgtggccgccagg
ggtctggacatcgaggacgtcgacctggtggtcaactacgacgcaccgtccagggcggat
acctacatccacaggatcggcaggaccggccgcgccggcagggagggggtatccctcaca
ctcgccaccaagagggacatggatttcgtccgtgactacgagcacgagatcggcatgagg
atcagggccatcgacgtggacgacatagaacccttcgagaccgtccacgagccggtcagg
agggagaggaggccgcagcgtggggagaggcaggcatccgcggacagggtgaaggccccc
cgcgggaagaaggccgggaaggagagcgccaggccccagaggtccgacgaccgcatggtg
gtggaggtcaacgtcgggaagaacgacgacgtcaacaggacccagctggccgatttcata
aggaagagggcgggactcggggagggcgatatcggaaaggtcggactcggtacggcctcg
tccttcgtggaggtcccggcggatgcggcggacctcgtcatcgagtccgtcggaggcagc
gtcttcggaggaaagaccgtcacctgcgactacgcccccgagaagaagaagttcgccgac
cgctacggcgggaagaatcgcaccgcctga
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