Methanomethylophilus alvi: MMALV_11840
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Entry
MMALV_11840 CDS
T02624
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
max
Methanomethylophilus alvi
Brite
KEGG Orthology (KO) [BR:
max00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
max03016
]
MMALV_11840
Enzymes [BR:
max01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MMALV_11840
Transfer RNA biogenesis [BR:
max03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMALV_11840
Prokaryotic type
MMALV_11840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGI85917
UniProt:
M9SKD6
LinkDB
All DBs
Position
1175604..1176914
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AA seq
436 aa
AA seq
DB search
MAFRECTTAEKDIGMLYYLSGADGTGGRLKARAEDFVVEEVSKGPERAENGKYTIATVKA
TNWESNRMIRLFAREMGMSRERIGFAGTKDKRAVTTQLMSFECPPSQLEKVQLKDVEFSD
IYTARRNIRIGDLVGNRFRIRVTGCSRPADEIASIVGEVAADIKANKGFPNYFGVQRFGV
MRPITHLVGERLVRGDIEGAVKCYVCTPSSDESRDKEAAECRKNLSESDDWASLLNSVPD
SMSFEKVMVQHMAENPGDWTGAIAAMPTNLQMMFVHAYQSYLFNIMLSRRIEKGLPMNRP
VVGDVVVPMSADMIPLHEQQIVATEKNIDLVERQVRLGKAFVTGCLFGSDSQFAEGEMGE
IERRVIEDNRLKAEDFIIPGLPHCSSEGDRREILCPVKDLTYEPDPDGYIVSFFLPKGNY
ATCLMREFMKSEMTDY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagggagtgtacgacggccgagaaggacatcggcatgctgtactacctcagc
ggagccgacggcacaggaggccgtctcaaggcgagggccgaggatttcgtggtggaagag
gtatccaaaggtcctgagagagcggagaacgggaaatacaccatcgccaccgtcaaagcc
accaactgggaatcgaaccgcatgatccgtcttttcgcccgcgagatgggcatgtcccgc
gaaaggatcggattcgccggaacgaaggacaaacgggccgtcactacacagctcatgtcg
ttcgaatgccctccatcccaactggagaaggtccagctgaaggatgtggaattctcggac
atctacactgccaggaggaacatacgtatcggggaccttgtaggcaacagattcaggatc
agggtcaccggctgcagcagaccggccgacgagatcgcatcgatcgtcggcgaggtcgcg
gccgacataaaggccaacaaagggttccccaactatttcggtgtccagagattcggagtc
atgaggcccataacccaccttgtaggcgagaggctcgtcagaggggacatcgaaggtgcc
gtcaaatgctacgtgtgcacgccatccagtgacgaaagcagagacaaggaagccgcagaa
tgcaggaagaacctgtccgaaagcgacgactgggcttctctcctgaactccgtccccgat
tccatgagtttcgagaaggtcatggtccagcacatggcggagaatcccggggattggacg
ggtgcgatagccgccatgcctaccaatctgcagatgatgttcgtccatgcctaccagtca
tatcttttcaacatcatgctgagcaggaggatagagaaaggactcccgatgaaccgcccg
gtcgtaggggatgtggtcgtacccatgagtgccgacatgatcccgttgcatgaacagcag
atcgtggccaccgagaagaacatcgaccttgtggaaagacaggtaaggctcggcaaagca
ttcgtgaccggatgtctgttcggcagcgattcccagttcgccgagggcgagatgggtgag
atcgagaggagagtcatagaagacaaccgcctgaaagccgaggatttcatcatacccgga
cttccccactgcagttcggaaggggacaggagggagatcctgtgtcctgtgaaggatctg
acgtacgaaccggaccccgacgggtatatcgtatcgttcttcctccccaaaggcaactat
gccacctgcctcatgagagaattcatgaagtcggagatgaccgactactga
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