Methanomethylophilus alvi: MMALV_12930
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Entry
MMALV_12930 CDS
T02624
Name
(GenBank) Excinuclease ABC subunit A
Organism
max
Methanomethylophilus alvi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
Viral_helicase1
DnaJ_CXXCXGXG
UvrA_DNA-bind
Anti-TRAP
RsgA_GTPase
nSTAND3
RNA12
Motif
Other DBs
NCBI-ProteinID:
AGI86024
UniProt:
M9SE95
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All DBs
Position
complement(1295064..1297346)
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AA seq
760 aa
AA seq
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MEKDEIEISGACENNLKNVSLSIPKNKLVVIAGVSGSGKSSLAFDTIAVESSRQWQASYP
LYLRNRMPRYERPAVDRIRNLTPSIVVDQKVVGANSRSTVGTVTDIAPLMRLLFSRVGRP
SAGAALCYSFNHPLGMCPDCNGLGRRLVLDESRLFDVDRSINENAILFTQFSTGSWQGWL
YYHCPLLDPAKKLRDYTPEEWKNLKYGPDEKVKMMYVSNNTGLGQYTDYEGVVPRFYRLY
LKRDISQLSRKIRDEVMRFVIDGPCASCGGSGLNPKALASRIGGYNIQDLYDMQVSDLIG
VLEDIDDPVGTPISRQITECLEHMVDVGLGYLSLSRRTDTLSGGEAQRLKMVRHLGSSLS
NITYIFDEPTAGLHPEDADRIGRLLLDLRDKHNTVLVVEHNRAMIELADRVIEIGPLAGS
RGGEVVFEGTPAELRDAGTYTAESLREGISVNRHPLPWTEGFEMKDVNLHNLRHVDVTIP
KGVLTAVTGVAGSGKSSLVVQRFSELYPDAIVIDQKPIGVSSRSTPATYTGVMDEIRRLF
GKENGVGPEWFSFNSKGGCPVCKGKGEIVPDVAFADPVAILCEQCQGRRYNPQALGYTYK
GKNIEEVLGLTVEQAMDFFADDRKIRKGLQCLVDVGMGYMTLGQNTSSLSGGENQRLKLA
SELGRKGRTYVLDEPTTGLHSKDVKHLLALFRGMVADGNTVIVVEHRLEMISQADWVIDM
GPEGGNLGGRVLFCGTPADLLEFEGSYTAEHLRKAVGRSG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacgagatcgagatatcgggcgcatgcgagaacaatctcaagaacgtgagt
ctcagcatcccgaagaacaagttggtcgtcatagccggggtatccggttccgggaagtcc
tcgctcgccttcgacaccatcgcagtcgagagcagccgtcagtggcaggcctcctatcct
ctgtacctgaggaacaggatgccccgctacgagcgtcccgccgtcgaccgcatcaggaat
ctgaccccctccatcgtcgtcgaccagaaggtcgtcggtgccaactcccgttccaccgta
ggcaccgtcaccgacatagcgcccctcatgaggctcctcttctcccgggtcggcaggccc
tccgccggcgccgccctctgctactccttcaatcatccgctgggcatgtgtcccgactgc
aacggtctcgggaggaggctcgtcctggacgagtcgagactgttcgacgtcgaccgcagc
atcaacgagaacgccatcctcttcacccagttctccaccgggtcgtggcagggttggctc
tattaccactgtcccctcctggatcccgccaagaagctccgcgactacacccccgaggaa
tggaagaacctcaagtacggccccgacgagaaggtcaagatgatgtacgtcagcaacaac
accgggctgggacagtacacggactacgagggggtggtccccagattctacaggctgtat
ctgaagagggacatatcccagctgagcaggaagatcagggacgaggtcatgaggttcgta
atcgacggtccctgcgcctcctgcggggggtcgggtctgaaccccaaggccctcgcatcg
aggataggcggatacaacatccaggatctctacgacatgcaggtctccgacctcataggc
gtcctggaggacatagacgacccggtggggacccctatctccaggcagataaccgaatgt
ctggaacatatggtggacgtgggtctggggtacctgagcctctcccggaggaccgacacc
ctgtcgggaggggaggcccagaggctgaagatggtgaggcatctcgggagcagcctctcc
aacataacatacatcttcgacgagcccaccgccgggctccaccccgaggatgccgaccgg
atcgggaggctcctcctggacctgagggacaaacacaacaccgtcctcgtggtggagcac
aaccgtgcgatgatagagctcgccgaccgcgtgatagagatcggtcccctggccggatcc
cgcggaggggaggtggtcttcgagggcaccccggcggagctgagggacgccgggacctac
accgccgaatccctccgggaggggatatccgtcaaccggcacccccttccgtggaccgag
gggttcgagatgaaggatgtgaacctccacaacctccgccacgtggacgtgaccatcccc
aaaggggtcctcacggccgtgacgggtgtggccggctccggcaagagcagcctggtcgtc
cagaggttctccgaactgtatccggacgccatagtcatcgaccagaagcccataggggtc
tcctcccgttccacccccgccacctacacgggtgtcatggacgagatcaggaggctcttc
gggaaggagaacggcgtcgggccggagtggttcagcttcaactccaaaggcggatgtccc
gtatgcaaggggaagggggagatcgtcccggacgtcgccttcgccgaccccgtggccatc
ctgtgcgagcagtgtcagggaaggagatacaacccccaggccctgggctacacctacaag
gggaagaacatcgaggaggtcctcggtctgacggtcgagcaggccatggacttcttcgcc
gacgacaggaagatcaggaagggcctgcagtgcctggtggacgtgggcatggggtacatg
accctcgggcagaacacctcgtctctctcgggaggggagaaccagaggctgaagctggcg
tccgagctggggcggaaggggaggacctacgtactcgacgaacccaccaccggtctccat
tccaaggatgtgaagcatctgctggcactgttcagggggatggtggcggacggcaacacg
gtgatagtggtggagcacaggctggagatgatatcccaggcggactgggtcatagacatg
ggtcccgagggagggaatctcgggggcagggtactgttctgcgggacgcccgcggacctg
ctggagttcgaggggtcgtacacggcggaacatctgaggaaggcggtcggccgttccgga
tga
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