Methanomethylophilus alvi: MMALV_16440
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Entry
MMALV_16440 CDS
T02624
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
max
Methanomethylophilus alvi
Pathway
max03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
max00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMALV_16440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
max03021
]
MMALV_16440
Enzymes [BR:
max01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMALV_16440
Transcription machinery [BR:
max03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MMALV_16440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AGI86361
UniProt:
M9SDL1
LinkDB
All DBs
Position
complement(1613161..1616820)
Genome browser
AA seq
1219 aa
AA seq
DB search
MRDLVNLYFRDKDIVNHHIASFDDFLATPDNPNSRMQRIVDDIRVPTDDATRGIIKLDPE
RTNGRDIEIVIGRRRLEDGSIDPQSKPTIRIEEPKVIEANGYCHDITPMEARLRNLNYMS
PVYVRFEVYEDGVEKDVENGGWVHVGDLPMMVKSKGCNLYRSNIEARLERKISDDEYAQE
IIKQKEDPREPGGYFIIGGTERVLITLEDLAPNRVMVEYNERYGAAVETAKVFSQREGYR
ALTQVEKKKDGTLMVSVPVVSGEIPLIALMKALGMEKDSDIYETIVSDDGMANIVYANIE
GSFDINSKTGLPVSQSPPSSSDKVLPGYHTTEDALLYLERNFAAGQAKEYRIKKVESILD
RSLLPHLGDTKEDRMKKAIYLGRIAKSVLELSLGKRKEDDKDHYANKRLKLSGDLMEDLF
RTSFSSLMKDLKYQLERNMGRKKNDYSVASSIRPDLFTHKLLHALATGNWVGGRAGVSQL
LDRTSNMSAMSHLRRITSSLTRSQPHFEARDLHPTQWGRLCPSETPEGQNCGLVKNAALI
IDVSEAFPENEVIRMLREFGLASVKEEDTRVFVNGNLVGTYSDPEKLVSEIRERRRYGLI
NSSINIRYDDEMGEVIINCDDGRLRRPLLVLKDGRTIITRKHIEGIREGKVTWDDLFRDG
ILEWLDAEEEEDSLVLVRPYNTPKRCPCCGHALSETDVDWMNPGKAEKFCELSCKWCHDK
FNVPSNIIGEDGKSEYTHMEVDPMIILGVAAGIVPYPEHNSAPRITMGAGMAKQALGIST
ANYRIRPDTRGHVMHYPQVPMVQTQTMDYMGYKYRPAGQNFCIAVLSYHGYNIEDAIVMN
KSSVQRGLGRSTFMRSYRAEERRYPGGQEDHFEIPSPDIVGARADEAYQSLGEDGLISPE
SYVQGSDVLIGKTSPPRFLEEETDFLTPQKRRETSVTVRPGEKGFVDSVIVTESENGSRL
VRVKVRDERIPELGDKFCSRFGQKGVVGRLVDQCDMPFTSDGVTPDLVVNPHGIPSRMTV
GHVLEMIAGKVGSMEGRTIDGTAFSGENEESIRDGLVRNGFNRSGKEIMYDGRTGRMIQT
EVYTGVIFYEKLHHMVSGKLHVRSRGPVQILTRQPTEGRSRQGGLRFGEMERDCLIGHGA
AMVIKDRLLDESDGTQQYVCGNPACGHIAIMDRRGQLYCPVCGNNSSVYLIQTSYAFKLL
MDELLSLGVAMRLQLEDLS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
ttgagggatctagtcaatctttatttcagggacaaggacattgtaaaccaccatatcgcc
tcctttgacgacttcctcgccactccggacaatccgaacagcaggatgcagaggatcgtg
gacgacatcagggtgcccaccgacgatgcgacccgcggcatcataaagctggacccggag
cgcaccaacggaagggacatcgagatcgtcatcggaaggaggaggctggaggacgggagc
atcgacccccagtccaagcccaccatcaggatcgaggagcccaaggtcatcgaggcgaac
ggatactgccacgacatcacccctatggaggccaggctcaggaacctcaactacatgtcc
cccgtgtacgtccgcttcgaggtctacgaggacggagtggagaaggacgtcgagaacggc
ggctgggtccacgtcggagaccttccgatgatggtcaaatccaaaggatgcaacctttac
aggtccaacatagaggcccgtctcgagcgcaagatcagcgacgacgagtacgcacaggag
atcatcaagcagaaggaggaccccagggagcccggaggatacttcatcatcggcggtacc
gagagggtcctcatcaccctcgaggacctcgcacccaacagggtcatggtcgagtacaac
gagaggtacggcgctgcggtcgagaccgccaaggtgttctcccagagggaaggataccgc
gcactgacccaggtggagaaaaagaaagacgggaccctcatggtgtccgtccccgtcgtc
tccggagagatccccctcatcgcccttatgaaggccctcggtatggagaaggattccgac
atctacgagaccatagtctccgacgacggaatggccaacatcgtctacgccaacatcgaa
ggctccttcgacatcaactccaagaccggtctgcccgtgtcccagtccccgccttcgtct
tccgacaaggtcctgcccggataccacaccaccgaggatgcgctgctgtacctcgagagg
aatttcgccgctggacaggccaaggagtacaggatcaagaaggtcgagtccatcctcgac
cgttccctgcttccgcacctcggagacaccaaagaggaccgcatgaagaaagcgatctat
ctgggacgtatcgccaagtccgtcctcgaactctccctcgggaagaggaaggaggacgac
aaggaccactatgccaacaagaggctcaagctctccggggacctcatggaggacctcttc
aggaccagcttctcctctctcatgaaggatctgaaataccagctcgagaggaacatgggc
aggaagaagaacgactatagcgtcgcctcgtccatcaggcccgacctgttcacccacaag
ctcctgcacgccctcgccaccggaaactgggtcggtggccgcgccggagtgtcccagctt
ctcgacaggacgtccaacatgtccgccatgtcgcacctcaggaggataacctcctccctt
accaggtcccagccccacttcgaggcccgtgaccttcaccccacccagtggggaaggctc
tgcccctccgagacccccgagggacagaactgcggtctggtgaagaacgccgccctcatc
atcgacgtctccgaggctttccccgagaacgaggtgataaggatgctcagggagttcggt
ctcgcctccgtcaaagaggaggacacccgtgtattcgtgaacgggaacctggtaggtacc
tactcggaccccgaaaagctcgtcagcgagatcagggagcgcaggaggtacggcctcatc
aactccagcatcaacatccgctacgacgacgagatgggcgaggtcatcatcaactgcgac
gacggaaggctcagaaggcccctgctcgtcctgaaggacggaaggaccatcatcaccagg
aagcacatcgagggcatccgcgagggcaaggtcacatgggacgacctgttccgcgatggt
atcctcgagtggctcgatgccgaggaagaggaggactccctcgtcctcgtccgcccctac
aacacccccaagagatgcccctgctgcggacacgcactgtccgagaccgacgtcgactgg
atgaaccccggcaaggcggagaagttctgcgagctctcctgcaagtggtgccacgacaag
ttcaacgtccccagcaacatcatcggcgaggacggcaagtccgagtacacccatatggag
gtcgacccgatgatcatcctcggagtcgccgcaggaatcgtcccctaccccgagcacaac
tccgcacctcgtatcaccatgggtgcaggtatggcaaaacaggctctgggtatatccacc
gccaactacaggatcaggcccgacacccgcggacacgtcatgcactacccgcaggtgccg
atggtacagacccagaccatggactacatgggatacaagtacaggcctgccggacagaac
ttctgcatcgccgtcctctcctatcacggatacaacatcgaggatgcgatcgtcatgaac
aagagctcggtgcagagaggactcggaaggtccaccttcatgaggtcctaccgtgccgag
gagcgccgctaccccggaggacaggaggaccacttcgagatcccctcgcccgacatcgtc
ggtgcccgcgccgacgaggcataccagtcgctcggagaggacggtctgatctcccccgag
tcctacgtgcagggatccgacgtcctgatcggaaagacgtccccgcccaggttcctcgag
gaggagaccgacttcctgaccccgcagaagaggagggagacctccgtcaccgtgaggccc
ggagaaaagggattcgtcgactccgtcatcgtgaccgagtccgagaacggttccagactc
gtccgcgtcaaggtcagggacgagaggatccccgagctcggagacaagttctgttccagg
ttcggacagaagggagtcgtcggaaggctcgtcgaccagtgcgacatgcctttcacctcc
gacggtgtcacccccgacctcgtcgtcaacccccacggtataccttcccgtatgaccgtc
gggcacgtgctcgagatgatcgcaggtaaggtcggttccatggagggacgcaccatcgac
ggtaccgcgttctccggtgagaacgaggagtccatcagggacggtctcgtcaggaacgga
ttcaacaggtccggtaaagagatcatgtacgacggaaggaccggccgcatgatccagacc
gaggtctacaccggtgtcatcttctacgagaagctgcaccacatggtcagcggaaagctc
cacgtcaggtccagagggcctgttcagatcctcaccaggcagcctaccgagggacgttcc
agacagggaggtctcaggttcggagagatggagcgtgactgtcttatcggtcacggggcc
gccatggtcatcaaggaccgtctgttggacgaatccgacggaacacagcagtatgtgtgc
ggcaaccccgcatgcggacacatcgccataatggacaggcgcggacagctctactgcccc
gtctgcggaaacaactcgagtgtatacctcatacagacatcctatgcgttcaagctcctc
atggacgagctcctgtcgctgggtgtggctatgagacttcagctggaggacctctcatga
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