Microbacterium azadirachtae: NFX31_05220
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Entry
NFX31_05220 CDS
T08922
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
maza
Microbacterium azadirachtae
Brite
KEGG Orthology (KO) [BR:
maza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maza03009
]
NFX31_05220
03016 Transfer RNA biogenesis [BR:
maza03016
]
NFX31_05220
Enzymes [BR:
maza01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
NFX31_05220
5.4.99.29 23S rRNA pseudouridine746 synthase
NFX31_05220
Ribosome biogenesis [BR:
maza03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NFX31_05220
Transfer RNA biogenesis [BR:
maza03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
NFX31_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF4915
Motif
Other DBs
NCBI-ProteinID:
UXW87756
LinkDB
All DBs
Position
complement(1113557..1114501)
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AA seq
314 aa
AA seq
DB search
MRSPLPVRDGVGATRLRVPDEGPWPTVGAYMAERFFHLDPERLLSRFDRGEIVAIDGSAL
SRETPLGVHDFVWYYREPPVEKQIPFDVEILHQDADLVVVDKPHFLPTTPGGKYLQNSAL
VRLRNALGIPELTPIHRLDRATAGLLMFSTRPATRGAYQLLFERREVEKVYEAVSPLPAD
WDPAAPALGGAAFPLVHRNHIVKLRGQVCVQTDPAREPNAETLIELRAFDDRVLHTLLRP
HSGRMHQLRVHLAELGAGILNDGFYPELLPETPDDFTRPLQLLARELRFTDPLTGAPREF
VTRRTLQEAPPARQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcccccctgcccgtgcgcgacggcgtcggcgcgacgcggctgcgcgtgcccgac
gaggggccgtggcccacggtcggcgcgtacatggccgagcgcttcttccacctcgacccg
gagcggcttctcagccgcttcgaccgcggcgagatcgtcgcgatcgacggctccgcgctg
agccgcgagaccccgctcggcgtgcacgacttcgtctggtactaccgcgagccgccggtg
gagaagcagatcccgttcgacgtggagatcctccaccaggacgcggatctcgtcgtggtc
gacaagccccacttcctgcccacgacgccgggcggcaagtacctgcagaactccgccctg
gtgcgcttgcgcaacgccctcggcatcccggagctcaccccgatccaccgcctggaccgc
gcgacggcgggcctgctgatgttctcgacccggcccgcgacccgcggggcgtaccagctg
ctcttcgagcgtcgcgaggtggagaaggtctacgaggccgtctccccgctgcccgcggac
tgggatcccgcggctccggctcttggcggcgccgcgttccccctcgtccaccgcaatcac
atcgtcaagctccgcggtcaggtctgcgtgcagacggaccccgcccgcgagccgaacgcc
gagacgctcatcgagctgcgcgccttcgacgaccgcgtgctgcacaccctgctgcgcccg
cactcgggacggatgcaccagctgcgcgtgcatctcgccgagctgggcgccgggatcctg
aacgacggcttctacccggagctgctccccgagacgcccgacgacttcacccgtcccctg
cagctgctggcccgcgagctgcgcttcacggatccgctcacgggcgcgccgcgcgagttc
gtcacccggcgcaccctgcaggaggcgccgcccgcgcgacagtga
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integrated database retrieval system
