Microbacterium azadirachtae: NFX31_07275
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Entry
NFX31_07275 CDS
T08922
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
maza
Microbacterium azadirachtae
Pathway
maza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFX31_07275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maza03019
]
NFX31_07275
03009 Ribosome biogenesis [BR:
maza03009
]
NFX31_07275
Enzymes [BR:
maza01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NFX31_07275
Messenger RNA biogenesis [BR:
maza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NFX31_07275
Ribosome biogenesis [BR:
maza03009
]
Prokaryotic type
rRNA processing factors
NFX31_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Rootletin
S1
Motif
Other DBs
NCBI-ProteinID:
UXW87306
LinkDB
All DBs
Position
1535402..1537762
Genome browser
AA seq
786 aa
AA seq
DB search
MADENNDNTPTLDLDALLPVALDSAERTTGEDAVEAVQSATDEVAPAQPEAAEAPAESEV
AETPAEPEVAAVPAEPEAADGASSEASTEPAADAAAEAAPQAPTEPEAVTAVSLGLIPEV
FVSRVSTQLHFYAPTIVPLPARTRESRESDDRRARGRGEGGEPRQRQRVVEYITEPKAIK
GSTRLEAKKQRRRDGRDAGRRRPVVTEAEFLARREAVDREMIVRSKNGRTQIAVLEDNVL
VEHYVARNQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWDGVETGNQP
RRIELALKAGDRVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPNGSMNGISRKLPDTER
ARLKRILKEVLPESSGVIVRTAAEGATEEQLTNDVQRLTAQWSYIQKQVETQQAPALLHA
EPDLLVKIVRDVFNEDFTRMRIQGADAGRTIRSYLESVAPDLLDRVEAYEDERDPFDAYR
VTEQIEKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAAEE
IVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTSLGLVQMTR
KKLGLGLLETFSEPCEVCAGRGVIVHHDPVVKHRAAAPQQSSNRRQRGGSSNGGSSNGGN
PPSAPAAPANGGTHSIPEGAKSALAQIAASTRPAGEAPAPADASEDVAAEAPVAERPKKQ
RKKRGSDRAKAPRTETEQLLDSVLDALPEPKAPGQGRNRRRVSTAGLSAGTAVVHTTEAA
PPREQG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaacaatgacaacacccctaccctcgacctcgacgcgctgctgccggta
gcgctcgactccgcagagcggacgacgggggaggacgccgtcgaggctgtgcagtccgca
accgacgaggtcgcaccggcgcagcctgaggctgcggaggccccggccgagtccgaggtc
gccgagaccccggccgagcctgaggtggcggctgtcccggccgagcccgaggccgccgac
ggcgcatcctccgaggcgagcaccgagcccgccgcggacgctgcggccgaggccgcgccg
caggcgccgaccgagcccgaggcggtcaccgcggtgagcctggggctgatccccgaggtg
ttcgtgtcgcgggtgtccacccagctgcacttctacgcgcccacgatcgtgccgcttccg
gcgcgcacgcgggagagccgggagagcgacgaccgtcgcgcccgtggccgcggcgagggc
ggcgagccgcgtcagcgtcagcgcgtggtcgagtacatcaccgagcccaaggcgatcaag
ggatccacccgtctcgaggccaagaagcagcgccgccgcgacggccgggacgccggtcgc
cgccgcccggtcgtcaccgaggcggagttcctcgctcgccgcgaggctgtcgaccgcgag
atgatcgtgcgctccaagaacggtcgcacccagatcgccgtgctcgaggacaacgtgctc
gtggagcactacgtcgcccgcaaccaggacgcgtcgctcatcggcaacgtgtacctcggc
cgggtccagaacgtgctcccgagcatggaggcggcgttcgtcgacatcggccgcggccgc
aacgcggtgctgtactccggagaggtcgactgggacggcgtcgagaccggcaaccagccg
cgacgcatcgagctcgccctcaaggccggcgaccgcgtgctcgtgcaggtcacgaaggat
ccggtcgggcacaagggcgcccgtctgacgagccagatctcgctgcccggccgctacctg
gtgtacgtgccgaacggctccatgaacggcatctcgcgcaagctcccggacaccgagcgt
gcgcgcctgaagcgcatcctcaaggaggtgctccccgagtccagcggcgtcatcgtgcgc
accgcggccgagggtgcgaccgaggagcagctcaccaacgacgtgcagcgcctcaccgcg
cagtggagctacatccagaagcaggtcgagacccagcaggctcctgcactgctgcacgcg
gagccggatctgctcgtcaagatcgtccgtgacgtcttcaacgaggacttcacccgcatg
cgcatccagggcgccgacgccgggcggaccatccggtcgtacctggagagcgtcgccccc
gatctgctcgaccgggtcgaggcctacgaggacgagcgcgacccgttcgacgcgtaccgc
gtgacggagcagatcgagaaggccctggatcgcaaggtctggctgccctccggcggatcc
ctcgtgatcgaccgcaccgaggcgatgacggtcgtcgacgtcaacaccggcaagttcgtc
ggatcgggcggaaacctcgaggagaccgtcaccaagaacaacctcgaggcggcggaggag
atcgtccgtcagctgcgcctgcgcgacatcggcggcatcatcgtcgtcgacttcatcgac
atggtgctcgagtccaaccgcgacctcgtgctgcgacgcctcgtcgagtgcctgagccgc
gaccgcaccaagcaccaggtcgccgaggtcacctcgctcggcctcgtgcagatgacgcgc
aagaagctcggcctcggcctgctggagaccttcagcgagccgtgcgaggtgtgcgcgggg
cgtggcgtgatcgtgcaccacgaccccgtcgtgaagcaccgtgcggccgccccccagcag
agctccaaccgtcgtcagcgcggcggatcctccaacggcggatcctccaacggcggcaac
ccgccgtccgccccggcggcgccggcgaacggaggcacgcacagcatcccggagggcgcg
aagtcggcgctcgcccagatcgccgcctcgacccgacccgccggtgaggcccccgccccg
gccgacgcgtccgaggacgtcgccgcggaggctcccgtcgccgagcggcccaagaagcag
cgcaagaagcgcggatccgaccgcgccaaggcgccgcgcaccgagaccgagcagctgctc
gactccgtgctggacgcgctgcccgagcccaaggcgcccggccagggccgcaaccgacgc
cgggtgagcacggcgggcctctccgcgggcaccgccgtcgtgcacacgaccgaggctgcg
ccgccgcgcgagcagggctga
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