Microbacterium azadirachtae: NFX31_09705
Help
Entry
NFX31_09705 CDS
T08922
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
maza
Microbacterium azadirachtae
Pathway
maza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFX31_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maza03019
]
NFX31_09705
03009 Ribosome biogenesis [BR:
maza03009
]
NFX31_09705
Enzymes [BR:
maza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NFX31_09705
Messenger RNA biogenesis [BR:
maza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NFX31_09705
Ribosome biogenesis [BR:
maza03009
]
Prokaryotic type
rRNA helicases
NFX31_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
HEM4
Motif
Other DBs
NCBI-ProteinID:
UXW84520
LinkDB
All DBs
Position
2028006..2029904
Genome browser
AA seq
632 aa
AA seq
DB search
MTEDAATHEDAPADAETTPGFEELGITGPVLAAIKALGYETPSAIQRETIPLLLGGRDVL
GTAQTGTGKTAAFALPILENLDLRQSKPQALVLAPTRELALQVAEAFEAYAAQMPGVHLL
PVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHLAKGTLDLSELKNLVLDEADEMLKMGFA
EDVEQILAQTPEDKQVALFSATMPATIRRLAQQYLHDPEEISVKAKTTTNANITQRYLVV
SYAQKVDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGYSAAAINGDIPQPMRERT
VGQLKDGKLDILVATDVAARGLDVERISHVVNFDIPTDTESYVHRIGRTGRAGRSGDAIS
FITPRERYLLKHIERATRQQPAQMQLPTTEDVNSTRLARFDDAITAALEETGRIEGFRDI
IAHYVRHHDVPEADVAAALAVVAQGETPLLLDPENDALSAAVAADNRPPRTDRPDRAGGR
DARDREPRTERRSRGDYTPYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAITIRPDFS
IVELPANLDSSVLDRLRDTRISGRLIEIQRDTGRPNRGPRRDRDDRGRDDRGYGDRPRRD
DRGYGDRPRRDDRPRDDRSTDARPPRKPRHKD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagacgccgcgactcacgaagacgcccccgccgacgccgaaacgacccccgga
ttcgaggagctcggcatcaccgggccggtgctcgccgcgatcaaggcgctcggctacgag
actccgtccgcgatccagcgcgagacgatcccgctgctgctcggcggccgcgacgtgctg
ggcaccgcgcagaccggaaccggcaagaccgccgcgttcgccctcccgatcctggagaac
ctggatctgcgtcagagcaagccgcaggcgctcgtgctcgcccccacgcgcgagctcgcc
cttcaggtcgccgaggcgttcgaggcctacgccgcccagatgcccggcgtgcacctgctg
cctgtgtacggcgggcaggggtacggcgtccagctgtccgccctgcgccgcggcgtgcac
atcgtcgtcggcacgcccggtcgcatcatggaccacctcgcgaagggcacgctcgacctg
tccgagctgaagaacctggtgctcgacgaggccgacgagatgctcaagatgggcttcgcg
gaggacgtggagcagatcctcgcccagacgcccgaggacaagcaggtggccctgttctcg
gccacgatgcccgccacgatccgccggctcgcgcagcagtacctgcacgaccccgaggag
atctcggtcaaggcgaagaccacgacgaacgccaacatcacgcagcgctacctggtcgtc
tcgtacgcccagaaggtggatgccctcacgaggatcctcgaggtggagaacttcgagggg
atgatcgtgttcgtccgcaccaagaacgagaccgagacgctcgccgagaagctccgcgcc
cgcgggtactccgccgccgcgatcaacggcgacatcccgcagccgatgcgcgagcgcacg
gtcggacagctcaaggacggcaagctcgacatcctcgtcgccaccgacgtcgcggcccgt
ggtctcgacgtcgagcggatcagccacgtcgtcaacttcgacatcccgaccgacaccgag
tcgtacgtgcaccgcatcggccgcaccgggcgcgccggccgctcgggcgacgcgatcagc
ttcatcaccccgcgcgagcggtacctgctcaagcacatcgagcgcgccacccgacagcag
cccgcgcagatgcagctgcccacgaccgaggacgtgaacagcacgcgcctggcgcgcttc
gacgacgccatcaccgcggcgctggaggagacgggacggatcgagggattccgcgacatc
atcgcccactacgtgcgccaccacgacgtgcccgaggccgatgtcgccgccgccctcgcc
gtcgtcgcgcagggcgagaccccgctgctgctggatcccgagaacgacgcgctgtccgcc
gccgtcgccgcggacaaccgccccccgcggaccgaccgcccggaccgcgccggtggccgc
gacgcgcgagaccgcgaaccccgcaccgagcgtcgcagccgcggcgattacacgccgtac
cgcatcgaggtcggccggcgccatcgcgtcgagccgcggcagatcgtcggcgcgctggcg
aacgagggcggcctcggtcgtgacgacttcggcgcgatcacgatccgcccggacttctcc
atcgtggagctgccggcgaacctcgactcctcggtgctggaccgcctccgcgacacgcgc
atctccgggcggctcatcgagatccagcgcgacaccgggcgcccgaaccgcggcccgcgt
cgtgaccgggatgaccgaggacgcgacgaccgcggctacggcgaccgcccgcgtcgtgac
gaccgcggctacggcgaccggccccgccgcgacgaccgtccccgggacgaccgcagcacg
gacgcgcgcccgccgcgcaagccgcgccacaaggactga
DBGET
integrated database retrieval system
