Microbacterium azadirachtae: NFX31_10905
Help
Entry
NFX31_10905 CDS
T08922
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
maza
Microbacterium azadirachtae
Pathway
maza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFX31_10905 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maza03021
]
NFX31_10905 (rho)
03019 Messenger RNA biogenesis [BR:
maza03019
]
NFX31_10905 (rho)
Transcription machinery [BR:
maza03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NFX31_10905 (rho)
Messenger RNA biogenesis [BR:
maza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NFX31_10905 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
VWA_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
UXW84745
LinkDB
All DBs
Position
complement(2281054..2282988)
Genome browser
AA seq
644 aa
AA seq
DB search
METISETQIDSSAPAGDASAEDAPKAPRKRAPRRATTASAAKAAEAGDTVVAAPAAEAPA
AEAAPAEEAPKAKAPRRSRAKKIEEAPAETASADAPAADAPAAEAAPSEDAPKAKAPRRS
RAKKTEDAPAETADAAPAEALAESAPKDAPADAAASDQASEAPAETGEEQTGRSRSRSRS
RSRNRNGGQDGQGNGGQNNGGQNQNQNQNGRGGAPADADEDGGSSRSRQRNKRRGGGNQN
VDEFETEIGEDDVLIPIAGILDVLDNYAFVRTTGYLSGPSDVYVSLGQVKKYNLRKGDAV
VGAIKQPREGEQQGRQKYNALVKVDSINGLSTEDAAARVEFSALTPLYPQERLRLETAPE
KLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPEE
VTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYN
IAAPASGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEF
KGTGNSELRLSRALADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQA
LEVVLGKLKETESNVEFLLQMQNAQLGKPASGTGHSHASENSIR
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtggagaccatctccgagacccagatcgacagctcggctccggccggcgacgcgtccgcc
gaggacgccccgaaggcgccgcgcaagcgcgccccgcgccgagcgaccaccgcgagcgcg
gccaaggcggccgaggccggcgacaccgtcgtcgcagcccccgccgccgaggcccccgcc
gctgaggccgctccggccgaggaggcgccgaaggccaaggccccgcgtcgcagccgtgcg
aagaagatcgaggaggctccggccgagaccgcgtccgccgacgctcccgccgcggacgcc
cctgccgccgaggctgctccctccgaggacgcgccgaaggccaaggccccgcgtcgcagc
cgtgcgaagaagaccgaggacgctccggcagagacggccgacgccgctcccgccgaggcg
ctggccgagtccgccccgaaggacgcgccggctgacgccgcggcgtccgaccaggcgtcc
gaggcgcccgccgagaccggcgaggagcagaccggccgcagccgcagccgctcgcgctcg
cgcagccgcaaccgcaacggcggtcaggacggccagggcaacggcggccagaacaacggc
ggccagaaccagaaccagaaccagaacggtcgcggcggtgctcccgccgacgccgacgag
gacggcggcagcagccgcagccggcagcgcaacaagcgccggggcggcggcaaccagaac
gtcgacgagttcgagaccgagatcggcgaggacgacgtcctgatcccgatcgcaggcatc
ctggacgtgctcgacaactacgcgttcgtgcgcaccaccggatacctctccggccccagc
gacgtgtacgtgtcgctcggccaggtgaagaagtacaacctgcgcaagggcgacgcggtc
gtcggcgcaatcaagcagccccgcgagggagagcagcagggccgccagaagtacaacgcc
ctggtcaaggtcgactcgatcaacggcctgagcacggaggacgcggccgcccgcgtcgag
ttctccgccctcaccccgctgtacccgcaggagcgcctgcgcctggagacggcgccggag
aagctcacgcagcgcatcatcgacctggtcgccccgatcggcaagggccagcgcggtctc
atcgtcgcgcccccgaaggccggcaagacgatcgtcctgcagcagatcgccaacgcgatc
gcgcagaacaaccccgaggtgcacctcatggtcgtgctcgtcgacgagcgccccgaagag
gtcaccgacatgcagcgcaccgtgaagggcgaggtcatcgcctcgaccttcgaccgcccg
gcggaggaccacaccacggtcgccgagctcgcgatcgagcgcgccaagcgcctcgtcgag
ctgggccgcgacgtggtcgtgctgctcgactcgatcacccgtctggggcgtgcgtacaac
atcgcggcgccggcctcgggccgtgtgctcaccggcggtgtggacgcctcggcgctgtat
ccgcccaagcgcttcttcggcgcggcgcgcaacatcgagaacggcggatccctcacgatc
ctcgccaccgctctcgtcgagaccggatccaagatggacgaggtcatcttcgaggagttc
aagggcaccggcaacagcgagctgcgcctgtcgcgcgccctcgccgacaagcggatcttc
ccggccgtcgacgtcaacgcgtcctcgacccgccgcgaggagatgctgctgagccccgac
gaggtcaagatcacctggaagctgcgccgcgccctcgccgggctcgacccgcagcaggcc
ctcgaggtcgtcctcggcaagctcaaggagaccgagtcgaacgtcgagttcctgctgcag
atgcagaacgcgcagctgggcaagccggcctccggcacgggccacagccacgcgtccgag
aacagcatccgctga
DBGET
integrated database retrieval system
