Microbacterium azadirachtae: NFX31_12815
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Entry
NFX31_12815 CDS
T08922
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
maza
Microbacterium azadirachtae
Brite
KEGG Orthology (KO) [BR:
maza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maza03032
]
NFX31_12815 (topA)
03400 DNA repair and recombination proteins [BR:
maza03400
]
NFX31_12815 (topA)
Enzymes [BR:
maza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NFX31_12815 (topA)
DNA replication proteins [BR:
maza03032
]
Prokaryotic type
DNA Topoisomerases
NFX31_12815 (topA)
DNA repair and recombination proteins [BR:
maza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NFX31_12815 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Cadherin
Motif
Other DBs
NCBI-ProteinID:
UXW85091
LinkDB
All DBs
Position
complement(2698403..2701261)
Genome browser
AA seq
952 aa
AA seq
DB search
MAQGKKLVIVESPTKMRSIQGYLGDGFEVLSSVGHIRDLADKKDIPAADKQAYGKYSIDV
DHDFDPYYVVSDRKTKTVAELKRALKNADELLLATDEDREGEAIAWHLLETLKPKVPYRR
MVFHEITKDAIQAAVENTRELDLALVDAQETRRILDRLYGWDVSPVLWYKVKSGLSAGRV
QSAATRMIVDRERERMAFVSAEYWDVDAQASASGTPFTVRLVRLDGGAIARGTDFDDNGA
LKKAVVVLDETAAAALAAAVDAVGSGTVTKVEAKPGTRSPYAPFTTSTLQQEAGRKLSMS
AKQAMSVAQRLYEKGYITYMRTDSTALSTQAVQAARSQAVALYGDAAVPLKPRVYKSKSK
NAQEAHEAIRPSGEQFRTPASVSSQLDREEQRLYDLIWKRTVASQMSDAKYETTTVTIAV
DTSTAPGASAGKVAEFTASGTVYTFKGFLEAYEEGRDERRNAADAAENQSLPAVAVGDVL
GVSEADAKPHRTTPKPRYTEASLVKALEEHGIGRPSTFASIIGTVIDRGYATKRGQALVP
TWMAFSVVRLLEQHFADLIDYDFTAALEDDLDAIARGEQKRIEWLHSFYFGSDSQVGLRQ
VVDNLGEIDARALNATRITDNATLRFGKYGPYLEVADPANPDAKPRIVNVPEDLAPDELT
AEKAQELIDAPVAGDRVLGENPANGKILVVKDGRFGPYIQENDPVSEDDQVDESTGEVVE
APKPKRGAKKEAAPKPRTASLFRSMSVDTIDLDTALKLLELPRVVGVDPATDEEITAQNG
RFGPYLKKGADSRSLESEQQIFDITLEQALEIYAQPKYGARRASSALAEFDADPTSGKPI
RIRDGRFGAYVTDGETNVTIPRGQQVQDITFEIAVQMLADKRAKGPAPKRGARTAAKKSA
PAKKAPAKAAAKKAPAKTAAKSDADKAAARSAAAKKAAATRAANAAKKQAGA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaaggcaagaagcttgtcatcgtcgagtccccgacgaagatgaggtccatccag
ggctatctcggcgacggcttcgaagtgctcagctcggtggggcacatccgcgacctcgcc
gacaagaaggacatccccgccgccgacaagcaggcgtacgggaagtattccatcgacgtc
gaccacgacttcgacccctactacgtcgtctcggaccgcaagaccaagacggtggccgag
ctcaagcgggctctgaagaacgccgacgagctcctgctcgccaccgatgaggaccgcgaa
ggcgaggccatcgcgtggcacctcctggagacgctgaagcccaaggttccctaccgccgc
atggtgttccacgagatcaccaaggacgcgatccaggccgccgtcgagaacacccgtgag
ctcgacctcgccctcgtcgacgcacaggagacccgccggatcctggaccgcctgtacggc
tgggacgtgtcgcccgtgctctggtacaaggtgaagtccggactctccgcaggccgggtg
cagtcggcggccacccggatgatcgtggaccgtgagcgcgagcgcatggcgttcgtgtcc
gccgagtactgggacgtcgacgcgcaggcgtcggcctcgggcactcccttcaccgtgcgt
ctggtgcggctcgacggcggcgcgatcgcccgcggcaccgacttcgacgacaacggcgcg
ctgaagaaggccgtcgtcgttctcgacgagacggcggccgccgcgctcgccgccgcggtc
gacgcggtcggatccggcaccgtgaccaaggtcgaggcgaaacccggaacccgcagcccg
tatgcgccgttcaccacctcgacgctgcagcaagaggcaggacgcaagctctcgatgagc
gccaagcaggcgatgagcgtcgcccagcggctctacgagaagggctacatcacctatatg
cgcacggactcgaccgcgctcagcacccaggcggtgcaggcggcccggtcgcaggcggtc
gctctctacggcgacgcggccgtgccgctcaagccccgcgtctacaagtccaagagcaag
aacgcgcaggaggcgcacgaggcgatccgcccctcgggcgagcagttccgcacgccggcc
tcggtgtcctcgcagctcgaccgcgaggagcagcggctctacgacctcatctggaagcgc
accgtcgcaagccagatgtccgacgcgaagtacgagaccaccaccgtcacgatcgccgtg
gacacgtcgacggcgcccggtgcaagcgcgggcaaggtcgcggagttcaccgcttcgggc
accgtctacaccttcaagggcttcctcgaggcgtacgaagagggcagggacgagcggcgc
aacgccgccgacgccgccgagaaccagtcgctccccgccgtcgccgtgggcgatgtgctc
ggcgtgtccgaggccgacgcgaagccgcaccgcacgacgcccaagccgcgatacaccgag
gcctccctggtcaaggcgctcgaggagcacggcatcggccgcccctcgacgttcgcgagc
atcatcggcacggtgatcgaccgcgggtacgcgaccaagcgcgggcaggccctcgtcccg
acgtggatggcgttcagcgtggtgcggctgctcgagcagcacttcgccgacctcatcgac
tacgacttcacggccgcgctcgaggacgacctcgacgcgatcgcccggggagagcagaag
cgcatcgagtggctgcactccttctacttcggatccgactcgcaggtgggtctgcgccag
gtcgtcgacaacctcggcgagatcgacgcgcgggcgctgaacgcgacgcggatcaccgat
aacgccacgctgcggttcggcaagtacggcccctacctcgaggtggcggatccggcgaac
cccgacgcgaagccccgcatcgtcaacgtgccggaggatctggctcccgacgagctgacc
gcggagaaggcgcaggagctcatcgacgcccccgtcgccggcgaccgcgtgctcggcgag
aacccggccaacggcaagatcctcgtcgtcaaggacggccgcttcggcccgtacatccag
gagaacgacccggtctccgaagacgatcaggtcgacgagagcaccggcgaggtcgtcgag
gcgcccaagcccaagcgcggcgcgaagaaggaggcggcgcccaagccgcgcaccgcctcg
ctgttccgctccatgtccgtcgacacgatcgatctcgacacggcgctcaagctgctcgag
ctcccgcgcgtggtcggtgtggatccggcgaccgacgaggagatcacggctcagaacgga
cgattcgggccctacctgaagaagggcgcggactcgcgctcgctggagagcgagcagcag
atcttcgacatcaccctcgagcaggccctcgagatctacgcgcagccgaagtacggcgcc
cgccgtgcgtccagcgcgctcgccgagttcgacgccgaccccaccagcggcaagccgatc
cggatccgtgacggccgcttcggcgcgtacgtcaccgacggcgagacgaacgtgaccatc
ccgcgcggccagcaggtgcaggacatcacgttcgagatcgcggtgcagatgctcgcggac
aagcgcgccaagggccccgcaccgaagcgcggcgcgcgcaccgctgcgaagaagtcggct
ccggcgaagaaggcaccggccaaggcggcggccaagaaggcccccgccaagacggcggcg
aagagcgacgcggacaaggcggcggcccgctccgccgcggcgaagaaggcggctgcgacg
cgcgccgccaacgccgcgaagaagcaggcaggcgcgtga
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