KEGG   Methanosarcina barkeri Fusaro: Mbar_A0016
Entry
Mbar_A0016        CDS       T00271                                 
Name
(GenBank) conserved hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mba  Methanosarcina barkeri Fusaro
Pathway
mba03410  Base excision repair
mba03430  Mismatch repair
mba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mbar_A0016
   03430 Mismatch repair
    Mbar_A0016
   03440 Homologous recombination
    Mbar_A0016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mba03400]
    Mbar_A0016
DNA repair and recombination proteins [BR:mba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Mbar_A0016
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Mbar_A0016
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Mbar_A0016
SSDB
Motif
Pfam: DHHA1 DHH
Other DBs
NCBI-ProteinID: AAZ69008
UniProt: Q46GI4
LinkDB
Position
1:19391..20368
AA seq 325 aa
MKELQNWIKAKTLILTHGDSDGICSGAIAKTAYPDAYVYFTNPVNLLEKLRSIKNVKTLI
VCDIAIDERNCSELHAALRGFAEKCTLYYIDHHPLPKSCEKESWFYHDIEACSSELTYRL
FEDCLDRDMRRIAIYGAIGDFCDNTPCLKNWVKDWDKRNLYFQAGTLTQAILYKGRNYEF
KRKLLDPLSKDIIPSNIPELLKLAREAAINEERLRLFVKYNVEVLGNSAYIVNTNNSISK
AAIYAASYGRREVGVAAEYRERKGAYDLSIRSRGKVDVNHILRSVAPRFGGSGGGHPLAA
GARIPEDSLNAFLRAFDKELGEAHG
NT seq 978 nt   +upstreamnt  +downstreamnt
atgaaagaactccagaactggatcaaagcgaaaactctaatccttactcacggagattcg
gatgggatatgttcaggtgcgattgcaaaaaccgcttatccggatgcgtatgtgtatttt
acaaatccggttaaccttcttgaaaaattaaggagtataaagaacgtgaaaacccttatt
gtttgcgatattgcaatcgatgaaaggaactgttccgaacttcacgcagcactcagagga
tttgcggagaagtgtaccctttactatatcgaccaccatcctctcccgaaaagctgtgaa
aaagaaagctggttctaccatgacatcgaagcctgttcctcagaattgacctacaggctc
tttgaggactgcctggacagagatatgcggaggatagcaatctatggagcaattggggat
ttctgcgacaacaccccatgtttaaaaaactgggtcaaagattgggataaaaggaatctt
tatttccaggccggaaccctgacccaggctatattatataaaggaaggaattacgaattc
aagaggaaacttcttgaccctctctcaaaggacatcatcccttcaaatattccagagttg
cttaaacttgccagggaagctgcaattaacgaggagagattaaggctttttgttaaatat
aatgtggaagtcctgggaaatagcgcatatattgtaaatacaaataactccatttcaaag
gcagcgatctatgcagcctcttacggcaggcgggaagtaggggttgcagccgaataccgt
gaaagaaagggagcttatgacctgagcatccgctcccgaggaaaggtcgacgtaaaccat
attctccgctcagtcgctccaagattcggaggaagcggcggtggacatccccttgcggca
ggcgctcgaattcccgaagattcccttaacgcattcctcagggcttttgataaagaactt
ggagaagcacatgggtaa

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