Methanosarcina barkeri Fusaro: Mbar_A0016
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Entry
Mbar_A0016 CDS
T00271
Name
(GenBank) conserved hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mba
Methanosarcina barkeri Fusaro
Pathway
mba03410
Base excision repair
mba03430
Mismatch repair
mba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mbar_A0016
03430 Mismatch repair
Mbar_A0016
03440 Homologous recombination
Mbar_A0016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mba03400
]
Mbar_A0016
DNA repair and recombination proteins [BR:
mba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mbar_A0016
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mbar_A0016
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mbar_A0016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AAZ69008
UniProt:
Q46GI4
LinkDB
All DBs
Position
1:19391..20368
Genome browser
AA seq
325 aa
AA seq
DB search
MKELQNWIKAKTLILTHGDSDGICSGAIAKTAYPDAYVYFTNPVNLLEKLRSIKNVKTLI
VCDIAIDERNCSELHAALRGFAEKCTLYYIDHHPLPKSCEKESWFYHDIEACSSELTYRL
FEDCLDRDMRRIAIYGAIGDFCDNTPCLKNWVKDWDKRNLYFQAGTLTQAILYKGRNYEF
KRKLLDPLSKDIIPSNIPELLKLAREAAINEERLRLFVKYNVEVLGNSAYIVNTNNSISK
AAIYAASYGRREVGVAAEYRERKGAYDLSIRSRGKVDVNHILRSVAPRFGGSGGGHPLAA
GARIPEDSLNAFLRAFDKELGEAHG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactccagaactggatcaaagcgaaaactctaatccttactcacggagattcg
gatgggatatgttcaggtgcgattgcaaaaaccgcttatccggatgcgtatgtgtatttt
acaaatccggttaaccttcttgaaaaattaaggagtataaagaacgtgaaaacccttatt
gtttgcgatattgcaatcgatgaaaggaactgttccgaacttcacgcagcactcagagga
tttgcggagaagtgtaccctttactatatcgaccaccatcctctcccgaaaagctgtgaa
aaagaaagctggttctaccatgacatcgaagcctgttcctcagaattgacctacaggctc
tttgaggactgcctggacagagatatgcggaggatagcaatctatggagcaattggggat
ttctgcgacaacaccccatgtttaaaaaactgggtcaaagattgggataaaaggaatctt
tatttccaggccggaaccctgacccaggctatattatataaaggaaggaattacgaattc
aagaggaaacttcttgaccctctctcaaaggacatcatcccttcaaatattccagagttg
cttaaacttgccagggaagctgcaattaacgaggagagattaaggctttttgttaaatat
aatgtggaagtcctgggaaatagcgcatatattgtaaatacaaataactccatttcaaag
gcagcgatctatgcagcctcttacggcaggcgggaagtaggggttgcagccgaataccgt
gaaagaaagggagcttatgacctgagcatccgctcccgaggaaaggtcgacgtaaaccat
attctccgctcagtcgctccaagattcggaggaagcggcggtggacatccccttgcggca
ggcgctcgaattcccgaagattcccttaacgcattcctcagggcttttgataaagaactt
ggagaagcacatgggtaa
DBGET
integrated database retrieval system