KEGG   Methanosarcina barkeri Fusaro: Mbar_A0309
Entry
Mbar_A0309        CDS       T00271                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
mba  Methanosarcina barkeri Fusaro
Brite
KEGG Orthology (KO) [BR:mba00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mba02048]
    Mbar_A0309
Enzymes [BR:mba01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mbar_A0309
Prokaryotic defense system [BR:mba02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Mbar_A0309
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C ResIII Cas3_HD DUF919 AAA_22 RAG1_DNA-bd
Other DBs
NCBI-ProteinID: AAZ69293
UniProt: Q46FP9
LinkDB
Position
1:362969..365194
AA seq 741 aa
MVILAKKDPDETLLEHTENALKVFKSIKDAYPETPQICGVPDFWEHLFYSIFFHDFGKAA
SGFQKSLCEEEKWKYRHEVLSAGFTSGLEYENESREAIALAIITHHKDVSYLREKYRIDS
NPLAKKRYIEKLQELTPNFEELREIQRKIPEISKKYLGFELNKFKEIKSIEEMVDPYKNS
IKPYKKQLDNDELTVLHGKYGIFLKGFLTACDHLASGGKYSLLSGIEDIRAVYNFSELRK
TQSQSLETKGDAFLIAPTGTGKTEAALFWSYANQNPGRSKRVFYLLPYTASINAMYKRLQ
KDFKDPELIGIQHGKAMYYLYQSFENEDYLTATKKAKQVKSLTNKIYRPYKIATPHQVLK
PMFGIRGFEQNLAEMSSALFIMDEIHAYDAHMTALILETLKILKGYQANFLIMSATLPSF
LKEMFKQDLEIETEISFTELELDEFTRHRVSVLKGGILDNLDLIRKELNHKKKVLVVCNT
VAQAQKIYKLLSQGIENSGLIHGRFILRDREKIESKLKNLNLLVGTQAIEVSLDIDYDVL
FSEPAPLDALIQRFGRINRKGWEEKIIKPVYVFEEGSEKDKYVYKNQELVSKSLELLSKE
SVLGESRIQELVDEVYSSGYQGSDLESFEMVKKTFSKFYSQIVPFINEKENQDEFYNLYQ
SVEVVPDQFKLEYLEEIENKKYFEAMKYVVSINLGQYNKLKTNNQIQIDSNMIFASVDYN
SELGLLLDSEDTIMGVFNKDF
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggtcatacttgcaaaaaaggacccggatgagactttactggaacatacagaaaacgcc
cttaaggtctttaaaagcataaaagatgcatatcctgaaactcctcaaatctgtggagtc
ccggatttctgggagcatctcttctactctattttttttcatgattttgggaaagctgca
tcaggattccaaaaatctctctgcgaagaagagaagtggaaatacaggcatgaagttctc
tctgctggcttcacttctgggcttgaatacgaaaatgaatcaagagaagctatagcttta
gcaataatcacgcatcataaagatgtgtcttatttgcgggaaaaatatcggatagactca
aatcctcttgctaaaaaaagatatattgagaagctacaggaattaactcctaactttgaa
gaattaagagagattcagaggaaaattccagaaattagtaagaagtatctgggttttgag
ctaaataaatttaaagaaataaaatcaattgaggaaatggttgatccttacaaaaattca
ataaaaccttacaaaaaacagcttgataatgatgagttaacagttttacacggaaagtac
gggatattcctcaagggatttttaaccgcctgtgatcatctggcatctgggggaaagtac
agcttattatccggaattgaagacataagagctgtatataatttctccgagctgagaaaa
actcagagtcaatcattagaaacaaaaggtgatgcctttctaattgcacctactggaact
gggaaaacagaagctgcattgttctggagttatgcaaaccagaatcctggcagatctaaa
agggtcttttacttgcttccttatactgcgagtatcaatgcaatgtataaacgacttcaa
aaggattttaaagatcctgaattgattggtatccagcatggaaaagccatgtactattta
tatcaaagctttgagaatgaagattacttgaccgcaactaaaaaagcaaagcaagtaaaa
agccttaccaataagatatacagaccatataaaatagcgactccacatcaggttcttaaa
cccatgtttggaattcgaggcttcgagcagaatcttgcagaaatgtccagtgctctgttc
ataatggatgaaattcacgcatatgatgctcatatgactgctctgatccttgagacactc
aagatcctaaaaggttatcaagcaaatttcttaatcatgtctgccactcttccttctttt
cttaaagaaatgtttaagcaggatctggaaatcgaaacggagatctcttttacagaactt
gaactggatgagtttacaaggcatagagtttctgttcttaaaggaggcattttagataat
ttggatctgatcagaaaagaactcaatcataagaaaaaggtacttgttgtttgtaatacc
gtcgctcaagcccaaaaaatatacaaactgctctctcaaggaatagaaaattcaggctta
atccatggaagatttattctacgagacagggaaaaaattgaatcaaaattgaagaaccta
aaccttttagtcggtacacaggcaatagaggtttcccttgatattgattatgatgtacta
ttttctgaaccggctcccctcgatgcacttattcagaggtttggaaggattaatcgaaaa
ggatgggaagagaaaataatcaagccagtgtatgtttttgaagaaggatctgaaaaagac
aaatatgtttacaaaaatcaggaattagtctctaaaagtctagagctgttaagtaaagag
agtgttttaggagaaagcagaattcaagaacttgtggacgaagtttattctagtggatat
cagggttcggatctggaatcctttgaaatggtgaaaaagaccttttctaagttctatagt
caaattgttcctttcataaatgaaaaagaaaatcaggacgaattttataacctttatcaa
tcagttgaagttgttcctgatcagtttaaacttgaatatcttgaggaaattgaaaataaa
aaatattttgaagctatgaaatacgttgtctcgataaatcttggccaatacaataaacta
aaaactaataaccagatccagattgactctaatatgatatttgcaagtgttgactacaat
tctgaactgggtctattgttggactcagaagacacaataatgggagtttttaacaaagat
ttttaa

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