KEGG   Methanosarcina barkeri Fusaro: Mbar_A0879
Entry
Mbar_A0879        CDS       T00271                                 
Name
(GenBank) monomeric archaeal DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mba  Methanosarcina barkeri Fusaro
Pathway
mba03030  DNA replication
mba03410  Base excision repair
mba03420  Nucleotide excision repair
mba03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mbar_A0879
   03410 Base excision repair
    Mbar_A0879
   03420 Nucleotide excision repair
    Mbar_A0879
   03430 Mismatch repair
    Mbar_A0879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mba03032]
    Mbar_A0879
   03400 DNA repair and recombination proteins [BR:mba03400]
    Mbar_A0879
DNA replication proteins [BR:mba03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mbar_A0879
DNA repair and recombination proteins [BR:mba03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mbar_A0879
   MMR (mismatch excision repair)
    Other MMR factors
     Mbar_A0879
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Mbar_A0879
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AAZ69853
UniProt: Q46E39
LinkDB
Position
1:1058686..1059423
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFKINPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKITDLLGIADKNDTVRMELEEENHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGKDFPILIDFEIANGSGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaagataaaccctgaaggtatttcggtaaaagccgttgac
cctgccaatgttgcaatgggaattttcgaacttggatcatctgctttcgacgaatataat
gctgatgaatgtgaaattggagtcgacctgaataagattacggacctgctgggaattgcg
gataagaatgacacagtccggatggaacttgaagaagaaaatcacaaactcttgattgat
gtcggagggctgtcttatacactttctcttctcgatccttccacaattcgggcagaacca
agagttccacagctcgaattgcctgccaaagtcgtccttaacggtgcagacctcagacgt
gctgttaaagctgccgaaaaaataagcgaccatatgcttatgggagtttcggacgataca
ttctatatggaagcaaaaggcgataccgaccaggttcgtctcgagatgggcagggaccag
ctaatcgatctgaaggcaggcgaagcatgttctcttttctctctggattatctgaccgat
atagtcaaacccacaaacaaagtcaatgaagttactctgtcccttggaaaagacttccca
atactcatagatttcgaaattgcgaatggttcaggaaggatttcttacctcctggctcca
agaattgagtcggactga

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