Methanosarcina barkeri Fusaro: Mbar_A1044
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Entry
Mbar_A1044 CDS
T00271
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
mba
Methanosarcina barkeri Fusaro
Pathway
mba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Mbar_A1044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mba03400
]
Mbar_A1044
DNA repair and recombination proteins [BR:
mba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Mbar_A1044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH_2
AAA_21
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
AAZ70012
UniProt:
Q46DN0
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Position
1:1271936..1274095
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AA seq
719 aa
AA seq
DB search
MKSILGMKTSQPLSSLREIHGIGERVADRLIEHFGTEEAALQAICEGDIASLSEINGISH
NFALSLARYARSRAEGCSISDFLRTKEALDIYSRLLELIKSFAHTTHARDKLNLFYPLPA
SRMDLIQERQAFVREYLELGNAFPENSEFLKLLTRVSELRPVPGNFRVRDRIILCGDSKT
LEAAREKFQAFLPVQSVENLSEFVDLARGYSNVTVFDDTYLGFDLPEDIEPEYFQDLSRA
EFWQVLPEKELAFFARNLDCIRACLSIVSSLRSENFELFEEFSKEKLDILETALSKLGED
GKPVEGFDPEIDRLGAALQNLDSALTSALREANKRMNRTLEASSLTLSGQELVRLVSGGM
EIKDLLTKELNRIYKTETSVVKEELVEKLGLQKQEKLMLDSLFSDEISYPLCADQSQLML
LRQKLNNSLEKTRLVRKRELAKTLSVFHQPVEKLVRKVLDFDLGFSIACFSTKFQLNLPE
LISEAGIGFTGGENLFLKARYGKIDPISYSIGKTGFSPAGLENRVVLLSGVNSGGKTSLL
ELFAQCVILGYMGFPVPAKKLELGPVEEFYYFGKSKGTLDAGAFETTLKQFSVLSEASEK
LVLADELESITEPGASARIIAGILEYLSRNEQSLGVFVSHLSELILENTGAKVRVDGIEA
DGLDSNLELIVNRNPVYNLIARSTPELIVERLFRKTTGKEQEFYSHLKDKFKTGSKANL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtattttgggtatgaaaacttctcagccgctctcaagcctgcgggaaatccat
ggaatcggtgaacgggtagctgacaggctgattgagcatttcggcactgaagaagcagct
cttcaggctatttgcgagggcgatatagcttcgctttcggaaatcaacggcatcagccac
aattttgccctttctcttgccagatatgccagatccagggctgagggctgctcaatttct
gattttctcaggacaaaagaagccctggatatttattcccgcctgcttgagctgataaaa
agttttgcccatacgacgcatgccagggataagctaaaccttttttacccactacctgct
tcacgcatggatcttatccaggaaaggcaggctttcgtaagagaataccttgaactggga
aatgccttccccgagaattccgaatttctgaaattgcttacgagagtcagtgaactcagg
cctgttcccggaaacttcagagtcagggaccggatcattctgtgcggagactcaaaaacc
cttgaagcagcccgagaaaagttccaggcctttttgcctgtccagtctgtagaaaaccta
tcggaattcgtggatcttgcaaggggttattccaatgttactgtttttgatgatacttat
cttggctttgatctacctgaagacattgaacccgaatatttccaggatctttccagagct
gaattctggcaggttttacctgaaaaagaactggcgttttttgcgcggaatctggactgc
atccgtgcctgcctgagtatcgtatcatctctccgctcagagaattttgagctctttgag
gagttttctaaagagaaacttgatatactcgagactgctctctcaaaactcggtgaggat
ggaaagcctgttgaaggttttgaccctgaaattgacaggctcggagcagcccttcaaaac
ctggactctgcattgacttctgccctgcgtgaggctaacaagcgtatgaaccgaaccctt
gaagcaagttcgcttactctgagcgggcaggaactcgtcaggcttgtgagcgggggaatg
gagattaaggacctgcttacaaaggaacttaatagaatctataaaactgaaacttcagtc
gtcaaagaagagcttgttgaaaagctagggcttcaaaagcaagaaaaactaatgctcgac
tcactcttttccgatgaaatttcctaccctctctgcgcagatcagtcccagctgatgctt
ctcaggcaaaagttgaacaatagccttgagaaaacaaggcttgtccggaaaagggaactt
gcaaaaacgctttcagttttccaccaacctgtagaaaagcttgtcagaaaagtcctggat
tttgaccttggcttttcaattgcctgtttttcgacaaagttccagcttaaccttcctgaa
ctgatttctgaagccggaataggttttacaggcggagaaaacctatttttaaaagctcgt
tacggaaagatcgatcctatcagttattccattggaaaaaccggcttttctccagcaggt
ctggaaaacagggttgtacttttgagcggagtaaattcaggtggcaaaacttccctgctc
gagctctttgcccaatgcgtaattcttgggtacatgggctttccggttcctgcaaaaaaa
cttgaactagggcctgtagaggaattctactattttgggaaatcgaaaggaactctcgat
gcaggagctttcgagactactctcaagcaattttcagtgctttccgaagcctcagaaaaa
ctggtgcttgcagacgaactggaatcgatcactgagcctggagcttctgcacgaattata
gcaggaattcttgaatatctttccagaaatgaacagagtcttggagtttttgtctcccat
ctttcggaacttatccttgaaaataccggagctaaagtaagagtagatggaattgaggcc
gatggtctggactccaaccttgagttaatcgtaaaccggaatcctgtatacaatcttatt
gctcgaagcactcccgagttgattgtggaacggctgttcagaaagaccactggaaaagag
caggagttttactcacatttaaaggataaatttaaaactggctcaaaagcaaacctttag
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