Methanosarcina barkeri Fusaro: Mbar_A1394
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Entry
Mbar_A1394 CDS
T00271
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
mba
Methanosarcina barkeri Fusaro
Pathway
mba03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mbar_A1394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mba03021
]
Mbar_A1394
Transcription machinery [BR:
mba03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Mbar_A1394
Prokaryotic type
Archaeal type
TFB
Mbar_A1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
Cas12f1-like_TNB
Sigma70_r4
Zn_ribbon_LysW
RPA_interact_C
Zn_ribbon_IS1595
Trm112p
Zn_ribbon_SprT
DUF7577
Zn_ribbon_PaaD
HTH_Tnp_ISL3
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
A2L_zn_ribbon
zf-ChsH2
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
AAZ70354
UniProt:
Q46CN8
LinkDB
All DBs
Position
1:complement(1717375..1718388)
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AA seq
337 aa
AA seq
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MVEVERVRYSDTLEREKIRAMIKARKEKQKEQSFEKEKAVCPECGSRNLVHDYERAELVC
GDCGLVIDADFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIEEVSRVSRKEIGRTYRFISRELALK
LMPTSPIDYVPRFCSGLNLKGEVQSKSVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagtcgaaagagttcgctattctgacactcttgaaagagaaaaaatacgtgcc
atgatcaaagctcgcaaagagaaacaaaaggagcaaagttttgagaaagaaaaggccgtg
tgtccagaatgcggcagcagaaacctcgtccacgactatgagcgagccgaactcgtgtgt
ggggactgcggacttgtcattgatgccgattttgtggatgaaggcccagaatggcgagct
ttcgatcatgatcaacgtatgaagcgttcccgtgtgggtgcgcccatgacatacacaatc
cacgacaaagggctttccacaatgattgactggaggaaccgcgactcctatggaaagtca
atatcttccaaaaatcgtgctcagctttatcgtttaagaaaatggcagcgtagaatccgt
gtaagtaacgcaactgaaagaaaccttgcatttgcactatctgaactggacagaatggct
tcggctctcggtcttccgagaactgtgcgggaaaccgcagctgtcgtctacagaaaagct
gtggacaagaaccttatccgtggaagaagcattgaaggtgttgccgcagccgctctttat
gctgcttgccgccagtgtagcgtcccaagaactcttgatgaaatcgaagaggtatccagg
gtcagccggaaagaaatcggaagaacttaccgttttatttccagagaactcgcactaaag
ctcatgcccacgtctcctatagactatgtcccaaggttctgttcaggccttaatcttaaa
ggagaagtccagtcaaagagcgttgagatcctgaggcaggcttccgaaaaggaactcaca
agcgggagaggtcccacaggagttgctgccgctgcaatttatattgcttccattctctgc
ggtgaacggagaactcagcgggaagttgcagatgtagccggggttacggaagtcactatc
cgaaacagatacaaagagcttgcagaagagctggatatagagattattctctaa
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