KEGG   Methanosarcina barkeri Fusaro: Mbar_A2075
Entry
Mbar_A2075        CDS       T00271                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mba  Methanosarcina barkeri Fusaro
Pathway
mba03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mbar_A2075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mba03032]
    Mbar_A2075
DNA replication proteins [BR:mba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Mbar_A2075
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_lid_RFC1 Rad17 AAA_22 RuvB_N AAA_14 AAA_16 AAA_33 AAA_assoc_2 AAA_30 nSTAND3 NACHT AAA_6 DNAX_ATPase_lid PPV_E1_C RNA_helicase IPT AAA_7 IstB_IS21 TsaE AAA_5 DUF815 AAA_28 nSTAND_NTPase5 RsgA_GTPase Cytidylate_kin NPHP3_N UBA_Rad5 DUF7462
Other DBs
NCBI-ProteinID: AAZ71006
UniProt: Q46AT6
LinkDB
Position
1:2622097..2624025
AA seq 642 aa
MTLAIEWAEKYRPQTLKEIVGNKKAVQYLRTWAEKWLSGIPDRRAVVLHGPAGVGKTSTA
HALARDLDWEVIELNASDQRTAGVIERVAGSAASMNTFFGGKRLIILDEADNIHGTADRG
GMRAIAGIIKNTLQPIVLIANDIYGLTPTIRNLCLEIKFGSVQSRSMVPALKKVCESEDI
LCSPDAIQQIAEGAGGDLRSAINDLQAAATGRKTLEVEDLSTSGRDVKENIFKAMQRIFK
STDCKKALEAARGLDESPEDLVHWIDENLPFQYASKDGNLEDIKTGFGYLSKADLYLGRV
KKRQNYRMWRYASMLMVCGTSVSKTRPYPGFIKYQPPSLWKKMGQIRSKRDLRDNIASKV
GEHNFESMRYSRNNLLELYSRMLKNEESAIEITAGLGLELEELIYLSGSTKASKKLQKIY
ERAQELLLEGNEESDGAEFFRTPAPPGNSKEDLSVFSVNNSVEKDGKHSERLEVPNSRTS
QGGQKTLNFGFDIPPEISPETKNSENNTSDTIKPGNLAPDILAPVTLTPDSFTSDTLIPE
QDQAEIDDIGIKSDSLTSISLEHDSLKVKNSSSLPGPVEKEAFSDSEPIENSISPELSRS
VKSVNREPAIKKVSDNSEKSEVKVSETPKKVESKTQKTLFDF
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgacgttggcaattgaatgggctgagaaataccgcccacagaccctgaaagagattgta
gggaacaagaaggcggtgcagtatttgcggacctgggctgagaagtggctttcaggcatt
ccagatagaagggcagtggtccttcatgggcctgcaggagtagggaagacttctactgcc
cacgctcttgcccgcgatctggattgggaagtcatcgaactcaatgcaagtgaccagagg
actgcaggtgttattgaaagagttgcggggtcggcagcttcaatgaataccttttttgga
ggaaaacgcctgattatcctggacgaagcggataatattcacgggactgcagacaggggc
ggaatgcgggctattgcaggaattataaagaacactcttcaacccatagtgctaattgca
aatgatatttatgggttgactcctactatccggaacctctgtctggaaataaagttcggc
tcagtgcagagccgttctatggtccctgctttgaagaaggtctgcgagagcgaggatatt
ttatgcagcccggatgcaatccagcaaattgctgaaggggctggaggggatctcagaagt
gcaattaacgaccttcaggctgcagctaccgggaggaaaacgctggaagttgaggatctc
agcacttcaggccgagatgtaaaggaaaacatcttcaaggcaatgcagagaatctttaag
agcacggactgtaaaaaggctctggaagcagctcgcggtcttgatgagagccctgaagac
cttgtacactggatcgacgaaaacctgcctttccagtatgcatctaaggatggaaatctt
gaggatataaaaactggctttggttatctctcaaaggccgatctctaccttgggcgcgta
aaaaaacgccagaactataggatgtggaggtatgctagcatgttgatggtctgtggaact
tcggtctcaaagacacggccctatcccggatttatcaagtaccagcctccttctctctgg
aaaaaaatggggcagatacgttctaaacgagacctcagggataatatagcttctaaagtt
ggagaacacaacttcgagtctatgcgttattcaagaaataacctgctggagctttactct
cgcatgttaaagaatgaagaatctgcgatcgaaattactgcaggcctcgggcttgaactt
gaagagctgatatatctctcggggagcacaaaagccagtaaaaagctgcagaaaatctac
gaaagggcgcaggaacttctccttgaaggaaatgaagaatctgatggagctgagtttttc
aggactcctgctcccccaggcaatagtaaagaggatctttctgttttctcagttaataat
tctgtggaaaaagatgggaaacattctgagaggctcgaagttcccaactccaggacttct
cagggtgggcagaagactcttaactttggttttgatattccacctgaaatttctccagaa
actaagaattcggaaaataatacttctgataccattaaacctggtaaccttgcacctgat
atccttgcacctgttaccttaacacctgatagttttacttctgacactcttataccggag
caggatcaggccgagattgatgatattgggatcaaatctgatagccttacatccatttca
cttgaacacgatagtctcaaggttaagaattcttcatccttgcctgggcccgttgagaag
gaagctttttctgactctgaaccgatagaaaatagcatctctcccgaactttccagatcc
gtgaaatctgtaaaccgtgagcctgctatcaaaaaagtttcagataattctgaaaaatct
gaggtcaaagtcagcgaaactcccaaaaaagtcgagtcgaaaacacaaaaaacgcttttc
gacttctaa

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