Methanosarcina barkeri Fusaro: Mbar_A2341
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Entry
Mbar_A2341 CDS
T00271
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mba
Methanosarcina barkeri Fusaro
Pathway
mba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mbar_A2341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mba03400
]
Mbar_A2341
Enzymes [BR:
mba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Mbar_A2341
DNA repair and recombination proteins [BR:
mba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mbar_A2341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAZ71264
UniProt:
Q46A28
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All DBs
Position
1:2965885..2966724
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AA seq
279 aa
AA seq
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MPSKDLLFGTAGIPRSTKGTSSISGIKRIRELDLDCMELEFVQGVRMGEKGAKNVLETAN
NEEVALSVHAPYYINLNSYEEKKLKASLERIYNAAKIGSLCGAESIILHAGFYQKSSKKS
TFESISKALKELTGQFREEGIPAVLRPETMGKRTQFGTLEEVLALSAEIEGVMPCLDFCH
LHAREGKENSYSEFTEILSRVEESLGKEGLSNMHMHVSGVEYGTNGEKRHLALKESDLNY
PELMKALKEFKARGRVILESPILEEDALMLRMLYNEIQF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaagatctacttttcggaaccgcaggaattccgagaagcacaaaaggaaca
agtagtatctcaggaatcaaaaggatcagggaacttgaccttgactgtatggaacttgaa
tttgttcagggagtacgcatgggcgaaaaaggggcaaaaaacgtcctggaaactgcaaat
aacgaagaggtagccttgagcgtccatgctccgtattacatcaacctgaattcttatgaa
gaaaaaaaattaaaagccagcctggaaagaatttacaatgccgcaaaaataggtagcctc
tgcggagctgaatcaatcatactgcatgccggcttttatcagaaaagcagcaaaaaaagc
acttttgagagcatatcaaaagccctcaaagaacttaccggacaattccgggaggaagga
atccctgcagtcctgcgtcctgaaactatgggtaagcgtacacaatttggaacgcttgaa
gaagtgcttgcattgagtgcagaaatcgaaggggtcatgccctgccttgatttttgccat
ctgcacgcaagagaaggcaaggaaaactcttactccgaatttacggaaattttatcaaga
gtagaggaaagccttggaaaggaggggctttcgaatatgcacatgcatgtctcaggagtt
gagtacggcacgaatggagaaaagaggcatctggctctgaaagaatctgacttaaactat
ccagaacttatgaaggccttaaaagaattcaaagccagaggaagggtcatacttgagagt
cccattcttgaagaagacgcacttatgctgaggatgctttataacgagatacaattttga
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