Methanosarcina barkeri Fusaro: Mbar_A2410
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Entry
Mbar_A2410 CDS
T00271
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mba
Methanosarcina barkeri Fusaro
Brite
KEGG Orthology (KO) [BR:
mba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mba03032
]
Mbar_A2410
03400 DNA repair and recombination proteins [BR:
mba03400
]
Mbar_A2410
Enzymes [BR:
mba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mbar_A2410
DNA replication proteins [BR:
mba03032
]
Prokaryotic type
DNA Topoisomerases
Mbar_A2410
DNA repair and recombination proteins [BR:
mba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mbar_A2410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
TfoX_C
IMS_HHH_1
Cas_TM1802
Motif
Other DBs
NCBI-ProteinID:
AAZ71330
UniProt:
Q469W2
LinkDB
All DBs
Position
1:complement(3044788..3047103)
Genome browser
AA seq
771 aa
AA seq
DB search
MHLIVTEKNIAARRIAAILAPKNPKKDRVSGVDVYRYEIVSDEEKQETVVVGLSGHIVGI
DFPKEYNNWQKVESKTLINADIITTPINRKIVTALKGLGKKASRVTIATDYDREGELIGV
EALNIIKQVNPDVPFDRVRYSAITPKAIEAAFSNATDVDFNLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGKMFLSVGRVQSPTLSLIVDREKERNVFVPTPYWEIYAELQNTEGKTFS
AQHSTRRFLDKKEATKAFKKLGKKAELKGIEKGKKTDQPPAPFNTTGFISAANSIGLSPA
NAMRIAEALYTNGYISYPRTDNTVYPETLDLRAQIEIFKEGPFKEYADALLEKAELIPTR
GKKETTDHPPIFPASLAKESDLKEDEWKVYELVVRRFFATFAGPSEWETMRLKLDINGEE
FKANGARLVEQGWRWYYPYNAPEDRLFPELHEGDSLKVIKKDMQDKETQPPGRYGQGRLI
NIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVMDTLEKYSPTITKPDMTKL
LEENMDRIAEGKIKEAAVLEESRDMLKQVFSELDKNREKIVESLQAGLREDKIIGTCSSC
GNELIIRRSKRGGRFIGCNNYPNCTFSLPLPRSGQIIVTDKVCEVHGLHHIRIINSGKRP
WDLGCPQCNFIEWQKTQQEEQAQQPKKEKPKSIKDLEGVGKATAGKLEEAGITSVEALAE
ADPVELAKAIKTSVKRVKSWQVSCNGIVTVEGNSTAEGNSTVKGNCTVEDA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttattgtaacggaaaaaaatatagcagcaaggaggatagctgcgattctggct
ccaaaaaacccgaagaaagatagagtcagtggagtagacgtgtaccggtatgagattgtg
tccgatgaagagaagcaggaaactgtagttgtagggctgtcgggccatatcgtagggatc
gactttcccaaggagtacaataactggcagaaagtagaatctaaaacccttatcaatgcc
gatattataacaactcctatcaaccgaaagatcgtaactgcacttaaaggcctggggaaa
aaggcgagcagggttacgattgccactgactacgaccgggaaggagaactcataggagtc
gaggctctcaatatcataaaacaggtaaatccggatgttccttttgaccgggtgcgctac
agcgcaataaccccaaaagcaatagaagccgcattttcaaatgcaacagatgttgatttt
aatctcgcggatgccggccattccaggcaggtcattgaccttgtctggggcgcagccctt
acccgctatatttctcttgctgcaggcaggcttgggaagatgtttctttccgtaggcagg
gtacagtcgccaactctttctcttattgtggacagggaaaaagaaaggaatgtttttgtc
ccgactccttactgggagatctatgccgaacttcaaaatacagaaggaaaaaccttctca
gctcagcattcaacccgccgttttctggataaaaaggaggcaacaaaagccttcaaaaaa
ctggggaaaaaggccgaattaaagggaatcgaaaaagggaaaaagaccgaccagcccccg
gctccttttaataccacaggtttcataagtgcagcaaactcaatcgggctcagccctgca
aacgcgatgcgcatagctgaagctctctatactaatggttatatttcgtaccccaggact
gacaatacggtctatcccgagacccttgacctgagggctcagattgagattttcaaagaa
ggtccctttaaagagtacgcagacgctctgcttgaaaaagctgaactcattcctacgcgg
ggaaaaaaggaaactaccgaccatccacctatttttccggcttcccttgcaaaagagtcc
gacttaaaagaggacgagtggaaggtctacgaacttgtagtcaggcgcttttttgcgacc
tttgcagggccaagcgaatgggaaactatgcgcttgaaacttgacatcaacggagaagaa
ttcaaggcaaacggggcaaggcttgtggaacagggctggagatggtactatccttacaat
gcgcctgaagaccggctgttccctgaactgcatgaaggcgattccctgaaagtgattaaa
aaagatatgcaggataaagaaacacagcctccaggccgttatggacagggaagacttatc
aatattatggaagagcttgggcttggaacaaaggcaacgcgacacgagataatcagcaag
ctttattccagggcctacattcacggaaacccggtgcagcctacgaatacctcttttgca
gtaatggatactctcgagaagtattcccctactatcacaaaaccagacatgacaaagctg
cttgaagaaaatatggaccggattgctgagggcaaaatcaaagaggctgccgttcttgaa
gaatcgcgggatatgttaaagcaggtcttctcggaactcgataaaaaccgggaaaaaatc
gtggaatctctccaggcaggccttagagaagataaaatcataggcacttgctctagctgt
ggaaacgaacttataatccggcgttcgaaaaggggaggccggtttataggctgcaacaat
tatccgaattgtaccttttctcttcctctgcctagaagtggacagatcatagttactgac
aaggtctgtgaagttcacggcctgcaccatatccgtataatcaactcgggaaaaaggccc
tgggaccttggttgccctcagtgtaatttcatagaatggcagaaaacccagcaggaagaa
caggcccagcagcctaaaaaagaaaagcccaaatcaattaaggatctcgaaggcgttgga
aaagccacagcaggaaaactggaagaagccggtattacaagtgtagaagccctggcagaa
gccgaccctgtagagcttgcaaaagcaataaagaccagtgtaaagagagtcaaaagctgg
caggtttcatgtaacggtatagttacagtagaaggcaacagcacagctgagggcaacagt
acagttaaaggcaactgtacagttgaagacgcatga
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